RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Nipsnap3aB1AWZ3 247 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Smok3aC0HKC8 504 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Smok3bC0HKC9 504 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Ccdc7bE9Q9Y3 381 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Tbc1d10aP58802 500 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Pfkfb2P70265 519 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Tmem109Q3UBX0 243 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Mief2Q5NCS9 454 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Adora2bQ60614 332 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Tsen15Q8R3W5 168 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Dnajc14Q921R4 703 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Znf687Q9D2D7 1237 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Mid2Q9QUS6 705 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 PpieQ9QZH3 301 aaKnown RBP17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Stx4P70452 298 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 UcmaQ14BU0 138 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Nlrp9bQ66X22 1003 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 DgkqQ6P5E8 934 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 SvopQ8BFT9 548 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Tyw3Q8BSA9 257 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Guf1Q8C3X4 651 aaKnown RBP17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Adam32Q8K410 754 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Arhgef3Q91X46 524 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Gimap3Q99MI6 301 aa17.88■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Lgr4A2ARI4 951 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Osbpl8B9EJ86 889 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Gm5930D3Z257 264 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Brd9Q3UQU0 596 aaKnown RBP17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Grm4Q68EF4 912 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Olfr212Q7TS33 327 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 CerkQ8K4Q7 531 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Adgre4Q91ZE5 689 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Stard13Q923Q2 1113 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Mov10l1Q99MV5 1187 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 NwcQ9CQI4 244 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Gm16440K7N6G6 218 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Gm8271L7N2E2 218 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Rgs5O08850 181 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Slc16a2O70324 545 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 PcnaP17918 261 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Lsm3P62311 102 aaKnown RBP17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Arf5P84084 180 aaKnown RBP17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Fam198aQ3UY90 562 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 WwoxQ91WL8 414 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Myl9Q9CQ19 172 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Rnft1Q9DCN7 395 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 P2rx7Q9Z1M0 595 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Plch2A2AP18 1501 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Serpina6Q06770 397 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Glt6d1Q2NKH9 311 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Lrrc75bQ7TPD7 306 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 XdhQ00519 1335 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Nfatc2ipO09130 412 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Slc16a8O35308 492 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 LtfP08071 707 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Otol1Q4ZJM7 482 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Tas2r115Q7M719 310 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Lin7aQ8JZS0 233 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Vps35Q9EQH3 796 aaKnown RBP17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 SynrgQ5SV85 1306 aa17.87■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Lpcat1Q3TFD2 534 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Vps72Q62481 368 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Olfr792Q7TRH9 311 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Mrps35Q8BJZ4 320 aaKnown RBP17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Atp7bQ64446 1462 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Gm20695H3BLK7 282 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Rfpl4bJ3QPR6 266 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Pik3r5Q5SW28 871 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 CltbQ6IRU5 229 aaKnown RBP17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Podnl1Q6P3Y9 559 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Olfr392Q7TRX6 312 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Camta2Q80Y50 1208 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Edf1Q9JMG1 148 aaKnown RBP17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Smok3cA0A087WSF2 504 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Celf5D3Z4T1 395 aaKnown RBP17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Nptx2O70340 429 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Atg9aQ68FE2 551 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Hmgb4Q6P8W9 181 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Vac14Q80WQ2 782 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 PaicsQ9DCL9 425 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Gm3383J3QQ59 259 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Gm3239L7N2D9 227 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Fgfr2P21803 821 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Rab12P35283 243 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Atoh1P48985 351 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Rin3P59729 980 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Ptger2Q62053 362 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Gm13078A2AGW8 474 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 AmacrO09174 381 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 FgrP14234 517 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Kcnq3Q8K3F6 873 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Pcdha3Q91Y16 942 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 TfQ921I1 697 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Sars2Q9JJL8 518 aa17.86■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Gm5160F8VPN3 147 aa17.85■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Chst3O88199 472 aa17.85■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Clhc1Q5M6W3 596 aa17.85■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Soat1Q61263 540 aa17.85■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Mib1Q80SY4 1006 aa17.85■□□□□ 0.45
Pcf11-201ENSMUST00000119954 Samd4aQ8CBY1 711 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms