RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Tas2r109Q7M707 316 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Abcg2Q7TMS5 657 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Tmc8Q7TN58 722 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 SgtaQ8BJU0 315 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Dnajc3Q91YW3 504 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Terb2Q9D494 218 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 NfkbiaQ9Z1E3 314 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Mup6A2AV72 179 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Impa1O55023 277 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Krt4P07744 525 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 FlgP11088 336 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Rfx2P48379 717 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Rpl22P67984 128 aaKnown RBP12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Syce2Q505B8 171 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Mef2dQ63943 514 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Rbmx2Q8R0F5 326 aaKnown RBP12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Dlg2Q91XM9 852 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cybrd1Q925G2 290 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Tnfaip8l2Q9D8Y7 184 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Tm9sf1Q9DBU0 606 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 FanceB8JJD6 213 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Hsd17b2P51658 381 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Nfe2l1Q61985 741 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Zswim9Q6DI92 447 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Nup93Q8BJ71 819 aaKnown RBP12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Znf426Q8R1D1 550 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 ArhgdiaQ99PT1 204 aaKnown RBP12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pitpnm1O35954 1243 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Banf1O54962 89 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gas2P11862 314 aaKnown RBP12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Bcl2l1Q64373 233 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Trpd52l3Q9CQ14 231 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Zswim7Q9CWQ2 152 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Spata9Q9D9R3 252 aa12.13□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Myh15E9Q264 1925 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm3252E9PUT9 216 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm8257E9Q8R3 264 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm3468E9QAJ8 216 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 PdynO35417 248 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Per1O35973 1291 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 BtkP35991 659 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cpne7Q0VE82 557 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pcgf5Q3UK78 256 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 StilQ60988 1262 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Mtnr1aQ61184 353 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gramd1bQ80TI0 738 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Q8R1Y2 203 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ino80bQ99PT3 375 aaKnown RBP12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Rbck1Q9WUB0 508 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 A530032D15RikE9Q422 215 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Fgf10O35565 209 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Sypl2O89104 264 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Plpp4Q0VBU9 271 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 CochQ62507 552 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Fam149b1Q6NSV7 578 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Znf473Q8BI67 892 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 AclyQ91V92 1091 aaKnown RBP12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 VillQ91YD6 859 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ndufs3Q9DCT2 263 aaKnown RBP12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Egfl7Q9QXT5 275 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Cfap44E9Q5M6 1843 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm6205E9PZS2 359 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Srpk1O70551 648 aaKnown RBP12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 LdhcP00342 332 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Rgs9bpQ148R9 237 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Kcnk9Q3LS21 402 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Akr1clQ3UXL1 322 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Msi1Q61474 362 aaKnown RBP12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ddx5Q61656 614 aaKnown RBP12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Tpd52Q62393 224 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 LnpkQ7TQ95 425 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Ppp1r12bQ8BG95 976 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Morc4Q8BMD7 928 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gm6367Q8C6L9 287 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pcdha1Q91Y21 948 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Acbd6Q9D061 282 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 HdcP23738 662 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Traf2P39429 501 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 CamkvQ3UHL1 512 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Soat1Q61263 540 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Olfr1414Q8VGU5 312 aa12.12□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Slc10a3P21129 473 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Rbp1Q00915 135 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Krt42Q6IFX2 452 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Fam126aQ6P9N1 521 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 PdhxQ8BKZ9 501 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 4932414N04RikQ8CEQ9 752 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 CtbsQ8R242 366 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Plekhh3Q8VCE9 796 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Pth2rQ91V95 546 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Kif19Q99PT9 997 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 OoepQ9CWE6 164 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Tbk1Q9WUN2 729 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Per3O70361 1113 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Gpatch4Q3TFK5 415 aaKnown RBP12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Traf3Q60803 567 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 E2f5Q61502 335 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Tas2r131Q7M708 310 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 March4Q80TE3 409 aa12.11□□□□□ -0.47
Pcif1-201ENSMUST00000041643 Tigd4Q8BUZ3 513 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms