RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ndc80Q9D0F1 642 aaKnown RBP11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Kcnq2Q9Z351 759 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Kng1O08677 661 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Acot1O55137 419 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Stt3aP46978 705 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Matn1P51942 500 aaKnown RBP11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 NcstnP57716 708 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 NadkP58058 439 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Htr4P97288 388 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Aqp1Q02013 269 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Stxbp5lQ5DQR4 1185 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rpl10Q6ZWV3 214 aaKnown RBP11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Q810S2 196 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Irak4Q8R4K2 459 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Kctd4Q9D7X1 259 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Actrt2Q9D9L5 377 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Kat6bQ8BRB7 1872 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Gm5930D3Z257 264 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pde9aO70628 534 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pou5f1P20263 352 aaKnown RBP11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mov10P23249 1004 aaKnown RBP11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Shmt1P50431 478 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Oas1fQ14AZ4 364 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ankrd13bQ5F259 626 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Grid2Q61625 1007 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Sema4aQ62178 760 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Dennd1cQ8CFK6 786 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Zdhhc3Q8R173 299 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Lsm12Q9D0R8 195 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Asap1Q9QWY8 1147 aa11.56□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tnip3A0A1D5RMN0 279 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ccr1P51675 355 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Hspa8P63017 646 aaKnown RBP11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mpp1P70290 466 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Kctd21Q3URF8 260 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Syce1lQ5D525 247 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tex24Q5DP50 351 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 CttnQ60598 546 aaKnown RBP11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Atg9bQ6EBV9 922 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 SgczQ8BX51 311 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Anapc2Q8BZQ7 837 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pcdha2Q91Y17 948 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Vangl2Q91ZD4 521 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tcaf2Q921K8 919 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ttc30bQ9CY00 664 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Kat2bQ9JHD1 813 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Limd1Q9QXD8 668 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tnni1Q9WUZ5 187 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 DgkdE9PUQ8 1220 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Myl4P09541 193 aaKnown RBP11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 PlaaP27612 794 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 AurkaP97477 395 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Slc10a5Q5PT54 434 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Scd4Q6T707 353 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rfx4Q7TNK1 735 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Clec4b1Q7TS58 209 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ccdc32Q8BS39 179 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mamdc2Q8CG85 686 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mrpl47Q8K2Y7 252 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Pcyox1Q9CQF9 505 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Thap11Q9JJD0 305 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Acox2Q9QXD1 681 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Tnks1bp1P58871 1720 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 SmoktcrA2KF29 484 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Sh3pxd2aO89032 1124 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cd3gP11942 182 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ass1P16460 412 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Nt5c2Q3V1L4 560 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Hspa1aQ61696 641 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 XpaQ64267 272 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Znf512Q69Z99 562 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Bmt2Q8BXK4 403 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Arhgap25Q8BYW1 648 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ppp4r4Q8C0Y0 875 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Mtss1Q8R1S4 759 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Olfr385Q8VGT1 312 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rad51cQ924H5 366 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Serbp1Q9CY58 407 aaKnown RBP11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Rpap3Q9D706 660 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Chst7Q9EP78 484 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Trpm5Q9JJH7 1158 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Ap4b1Q9WV76 738 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Slc26a3Q9WVC8 757 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 FocadA2AKG8 1798 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Arhgef10Q8C033 1345 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f15A0A087WR44 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f12A0A0A0MQP3 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 0610012G03RikA0A0J9YTR2 95 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f9A2BFZ7 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f7A2BHG6 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f19A2CG71 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f10A2CG92 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f3A2CGC2 496 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f13B8JKF6 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Vmn2r72D3Z4N8 856 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 1600015I10RikE9Q745 711 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Cyp2j12G3UXT0 502 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f2J3QMS5 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f25J3QMV9 498 aa11.55□□□□□ -0.56
Topbp1-201ENSMUST00000035164 Btbd35f6J3QMW9 498 aa11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms