RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Trpd52l3Q9CQ14 231 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 MceeQ9D1I5 178 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gpatch1Q9DBM1 930 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 AuhQ9JLZ3 314 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Ildr2B5TVM2 661 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Stmn3O70166 180 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Oas1aP11928 367 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rpl22P67984 128 aaKnown RBP10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Stt3bQ3TDQ1 823 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gdpd4Q3TT99 632 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Grm6Q5NCH9 871 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Wbp4Q61048 376 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 ChpfQ6IQX7 774 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tex13c3Q810P0 219 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pramel7Q810Y8 479 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Nat14Q8BVG8 206 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rnf208Q8K0W3 265 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Oas1gQ8K469 367 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Cyp2c50Q91X77 490 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 NlnQ91YP2 704 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 XpotQ9CRT8 963 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Smpd3Q9JJY3 655 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Trip4Q9QXN3 581 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Mroh5E9PUJ8 762 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Spata31d1dE9Q5W2 1247 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 MrasO08989 208 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Serpina3kP07759 418 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 BtkP35991 659 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Slc1a2P43006 572 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Cct7P80313 544 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Olfm4Q3UZZ4 505 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Bcar1Q61140 874 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Orai3Q6P8G8 290 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Dhx33Q80VY9 698 aaKnown RBP10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Slc6a15Q8BG16 729 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Arhgap28Q8BN58 729 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 OlahQ8R197 265 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Clvs1Q9D4C9 354 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Hormad1Q9D5T7 392 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Trpm5Q9JJH7 1158 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 XkQ9QXY7 446 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Krt6bQ9Z331 562 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 MtrA6H5Y3 1253 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Cyp2t4E9PWV0 503 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gm3526E9PZM0 191 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Ppef1O35655 650 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Itgb3O54890 787 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tp53P02340 387 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 TnfP06804 235 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Il2rbP16297 539 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tulp2P46686 562 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Psen1P49769 467 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pdss1Q33DR2 409 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gcnt3Q5JCT0 437 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Sema5bQ60519 1093 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Otud6aQ6IE21 290 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rxfp1Q6R6I7 758 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Wwp1Q8BZZ3 918 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rab36Q8CAM5 267 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tbc1d13Q8R3D1 400 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 OoepQ9CWE6 164 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pi16Q9ET66 489 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Thap11Q9JJD0 305 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gm13941A2AJ38 245 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Acnat1A2AKK5 416 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 4930444G20RikD3Z741 495 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gm8237E9Q257 205 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Zfp882E9Q4R4 555 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tnfaip1O70479 316 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 S100a6P14069 89 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Naa20P61600 178 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Frg1P97376 258 aaKnown RBP10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Q32P12 615 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 CamkvQ3UHL1 512 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Glra2Q7TNC8 452 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Mcph1Q7TT79 822 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Fam205cQ80YD3 371 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pnma2Q8BHK0 365 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Iars2Q8BIJ6 1012 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tmem161bQ8C2L6 487 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Prr33Q8C494 260 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Leg1Q8C6C9 337 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Kat5Q8CHK4 513 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Acsm2Q8K0L3 575 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Cib4Q9D9N5 185 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Igdcc4Q9EQS9 1252 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 NfkbizQ9EST8 728 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Kat6bQ8BRB7 1872 aa10.12□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rhox3cA2AWM0 215 aa10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rhox3hL7MU37 215 aa10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 C1dO35473 141 aa10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tgm2P21981 686 aaKnown RBP10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 IppP28575 584 aa10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 RxrgP28705 463 aa10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Sox6P40645 827 aa10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 PctpP53808 214 aa10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Emilin3P59900 758 aa10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Ceacam5Q3UKK2 947 aa10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rhox3aQ4TU90 215 aa10.11□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Q5EBG8 199 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms