RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 3830403N18RikQ9D6C3 208 aa11.22□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Chmp2aQ9DB34 222 aa11.22□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Scnn1gQ9WU39 655 aa11.22□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Map3k14Q9WUL6 942 aa11.22□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Cdc7Q9Z0H0 564 aa11.22□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Elf4Q9Z2U4 655 aa11.22□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Gm13089A2AGW7 455 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 MndalD0QMC3 538 aaKnown RBP11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Arfip1G5E8V9 373 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Vmn2r67K7N6T2 851 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Pex5O09012 639 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Per2O54943 1257 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 C4bpaP08607 469 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Rc3h2P0C090 1187 aaKnown RBP11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Ctnna1P26231 906 aaKnown RBP11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Vav1P27870 845 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Nkx2-5P42582 318 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Zfp217Q3U0X6 1041 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Plcl1Q3USB7 1096 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Ccdc110Q3V125 848 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Gm5168Q4KL04 211 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Gpr19Q61121 415 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Znf185Q62394 352 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Tha1Q6XPS7 400 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 HhipQ7TN16 700 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Olfr698Q7TRN4 311 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Gabbr2Q80T41 940 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Rspo4Q8BJ73 228 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Trpa1Q8BLA8 1125 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Mpp7Q8BVD5 576 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Abi3Q8BYZ1 367 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Trub1Q8C0D0 338 aaKnown RBP11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Wdr27Q8C5V5 780 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Tmem198bQ8CFU0 350 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Btbd6Q8K2J9 488 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Olfr478Q8VG04 314 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Uap1Q91YN5 522 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Rgs3Q9DC04 966 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Xab2Q9DCD2 855 aaKnown RBP11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Serpina1fQ9DCQ7 411 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Xpo7Q9EPK7 1087 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Rtn3Q9ES97 964 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Prmt1Q9JIF0 371 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Trpc2Q9R244 1172 aa11.21□□□□□ -0.61
Tubb1-201ENSMUST00000016399 Znf518bB2RRE4 1077 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Gm20431E9PY39 371 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Akap1O08715 857 aaKnown RBP11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ppargc1aO70343 797 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Mybpc3O70468 1270 aaKnown RBP11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Usp2O88623 613 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Sp1O89090 784 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ptger3P30557 365 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ptger1P35375 405 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Lhx3P50481 400 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 AdkP55264 361 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 E2f2P56931 443 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Vps45P97390 570 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Agbl1Q09M05 972 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Nudt18Q3U2V3 323 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Gzf1Q4VBD9 706 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Rtl3Q6P1Y1 553 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ccdc117Q6PB51 277 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Dpy19l3Q71B07 716 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 FukQ7TMC8 1090 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Rnaseh2bQ80ZV0 308 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 DcakdQ8BHC4 231 aaKnown RBP11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Kbtbd3Q8BHI4 607 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Edem2Q8BJT9 577 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 RbakQ8BQC8 711 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ubr7Q8BU04 425 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Itpk1Q8BYN3 419 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Taf5Q8C092 801 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Sh3rf3Q8C120 878 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 TdrpQ8C5P7 182 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 4921504E06RikQ8CET2 560 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Kctd2Q8CEZ0 266 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Mill2Q8HWE5 355 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Sirt5Q8K2C6 310 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Pitrm1Q8K411 1036 aaKnown RBP11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Slc5a9Q8VDT1 685 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Zfp617Q91WM0 559 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Pomgnt1Q91X88 660 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Pcdha3Q91Y16 942 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Dph5Q9CWQ0 281 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 PmpcbQ9CXT8 489 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Tpd52l2Q9CYZ2 220 aaKnown RBP11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Get4Q9D1H7 327 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 4930578G10RikQ9D4Q4 153 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 EtfbQ9DCW4 255 aaKnown RBP11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Nova1Q9JKN6 507 aaKnown RBP11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 AuhQ9JLZ3 314 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Bex2Q9WTZ8 129 aa11.2□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Klhl41A2AUC9 606 aa11.19□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Gm14525B1AZA0 212 aa11.19□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Gm2012B1B0R1 212 aa11.19□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ccdc8D3YZV8 685 aa11.19□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ccdc149F6V035 524 aa11.19□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Gm3182K7N6T8 263 aa11.19□□□□□ -0.62
Tubb1-201ENSMUST00000016399 Ptch2O35595 1182 aa11.19□□□□□ -0.62
Tubb1-201ENSMUST00000016399 EmbP21995 330 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms