RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 DQX1Q8TE96 717 aaKnown RBP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 RNF139Q8WU17 664 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 FAM172AQ8WUF8 416 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 SPOCK2Q92563 424 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 TBCBQ99426 244 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 LRRC3Q9BY71 257 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 IL21Q9HBE4 155 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 CLIC5Q9NZA1 410 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 SYNJ2BP-COX16A0A087WUM0 186 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 BCLAF3A2AJT9 711 aaKnown RBP9.75□□□□□ -0.85
PHGDH-228ENST00000641847 M0QYT0 321 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 ARNTLO00327 626 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 MDM4O15151 490 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 HYAL3O43820 417 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-228ENST00000641847 TLR5O60602 858 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 LRCH4O75427 683 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 FGF19O95750 216 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 TOP3BO95985 862 aaKnown RBP9.75□□□□□ -0.85
PHGDH-228ENST00000641847 F11P03951 625 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 COMTP21964 271 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 GBP1P32455 592 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 SLC1A1P43005 524 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 SSR1P43307 286 aaKnown RBP9.75□□□□□ -0.85
PHGDH-228ENST00000641847 SOX9P48436 509 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 PPP3CCP48454 512 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 TUBP50607 506 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 EPHA5P54756 1037 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 CYP4F8P98187 520 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 FCHO2Q0JRZ9 810 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 LMAN2Q12907 356 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 SLC25A52Q3SY17 297 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 C10orf120Q5SQS8 335 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 HECTD3Q5T447 861 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 SNX30Q5VWJ9 437 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 MSANTD2Q6P1R3 559 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 PEX26Q7Z412 305 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 SLFN11Q7Z7L1 901 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 TMEM150AQ86TG1 271 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 TADA2BQ86TJ2 420 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 PROSER1Q86XN7 944 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 ADAM32Q8TC27 787 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 MRPS31Q92665 395 aaKnown RBP9.75□□□□□ -0.85
PHGDH-228ENST00000641847 ZSWIM3Q96MP5 696 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 CDK5RAP1Q96SZ6 601 aaKnown RBP9.75□□□□□ -0.85
PHGDH-228ENST00000641847 NPY6RQ99463 290 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 NACA2Q9H009 215 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 CCSER2Q9H7U1 834 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 OLA1Q9NTK5 396 aaKnown RBP9.75□□□□□ -0.85
PHGDH-228ENST00000641847 THG1LQ9NWX6 298 aaKnown RBP9.75□□□□□ -0.85
PHGDH-228ENST00000641847 DDIT4Q9NX09 232 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 RRN3Q9NYV6 651 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 COX16Q9P0S2 106 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 CALCOCO1Q9P1Z2 691 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 RASAL2Q9UJF2 1139 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 NUDT5Q9UKK9 219 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 ALG6Q9Y672 507 aa9.75□□□□□ -0.85
PHGDH-228ENST00000641847 CELSR3Q9NYQ7 3312 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 ANAPC1Q9H1A4 1944 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 A0A1W2PRU2 124 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 IRAK2O43187 625 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 MSI1O43347 362 aaKnown RBP9.74□□□□□ -0.85
PHGDH-228ENST00000641847 ZNF500O60304 480 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-228ENST00000641847 RNF8O76064 485 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 TRUB2O95900 331 aaKnown RBP9.74□□□□□ -0.85
PHGDH-228ENST00000641847 IGLV3-25P01717 112 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 TNNT1P13805 278 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 TCF4P15884 667 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 GJC1P36383 396 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 CCR2P41597 374 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 DNA2P51530 1060 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 HDAC4P56524 1084 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 TAS2R40P59535 323 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 ETF1P62495 437 aaKnown RBP9.74□□□□□ -0.85
PHGDH-228ENST00000641847 SLC25A11Q02978 314 aaKnown RBP9.74□□□□□ -0.85
PHGDH-228ENST00000641847 EFEMP1Q12805 493 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 NME3Q13232 169 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 ITPRIPL2Q3MIP1 535 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 RAB6CQ53S08 254 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 CC2D1AQ6P1N0 951 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-228ENST00000641847 TXNDC11Q6PKC3 985 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 C19orf48Q6RUI8 117 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 SYT10Q6XYQ8 523 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 GAREM2Q75VX8 874 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 STRADAQ7RTN6 431 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 CYP2U1Q7Z449 544 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 BNIPLQ7Z465 357 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 NT5DC3Q86UY8 548 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 ARFGAP1Q8N6T3 406 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 DEFB124Q8NES8 71 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 SHKBP1Q8TBC3 707 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 CENPIQ92674 756 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-228ENST00000641847 NT5C3BQ969T7 300 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 SERPINB11Q96P15 392 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 WDR24Q96S15 920 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 RAB6CQ9H0N0 254 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 DUSP15Q9H1R2 295 aaPredicted RBP9.74□□□□□ -0.85
PHGDH-228ENST00000641847 ATXN3LQ9H3M9 355 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 TRPC7Q9HCX4 862 aa9.74□□□□□ -0.85
PHGDH-228ENST00000641847 PIGVQ9NUD9 493 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms