RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 PAK1Q13153 545 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 MORC3Q14149 939 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 FSCBQ5H9T9 825 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 PITRM1Q5JRX3 1037 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 SYPL2Q5VXT5 272 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 RAP1GAP2Q684P5 730 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 GJB7Q6PEY0 223 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 CIR1Q86X95 450 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-213ENST00000641272 SCUBE3Q8IX30 993 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 LMLNQ96KR4 655 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 CYTH4Q9UIA0 394 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 CEP83Q9Y592 693 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.32■□□□□ 0.36
PHGDH-213ENST00000641272 SYNJ2BP-COX16A0A087WUM0 186 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 BICDL2A1A5D9 508 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 CAPN9O14815 690 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 MID1O15344 667 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 P4HA2O15460 535 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 THAP12O43422 761 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 GADD45BO75293 160 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-213ENST00000641272 LETM1O95202 739 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-213ENST00000641272 APOEP02649 317 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 PPP1R2P41236 205 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 GPD2P43304 727 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 PSMD8P48556 350 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 CCDC157Q569K6 752 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 DCAF6Q58WW2 860 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 MS4A13Q5J8X5 152 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 MPP7Q5T2T1 576 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 IL27RAQ6UWB1 636 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 SLCO6A1Q86UG4 719 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 LGI2Q8N0V4 545 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 EHBP1Q8NDI1 1231 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 ADAMTS14Q8WXS8 1223 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 MRGPRX3Q96LB0 322 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 CRACR2AQ9BSW2 395 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 PCED1AQ9H1Q7 454 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 PABPC3Q9H361 631 aaKnown RBP17.31■□□□□ 0.36
PHGDH-213ENST00000641272 FBRSQ9HAH7 460 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 COX16Q9P0S2 106 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 APOBEC2Q9Y235 224 aaKnown RBP17.31■□□□□ 0.36
PHGDH-213ENST00000641272 TLR6Q9Y2C9 796 aa17.31■□□□□ 0.36
PHGDH-213ENST00000641272 A0A1W2PP55 124 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 TTC34A8MYJ7 566 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 PAPSS1O43252 624 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 LUC7L3O95232 432 aaKnown RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 ATXN1LP0C7T5 689 aaKnown RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 GNA15P30679 374 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 STK19P49842 368 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 APBA1Q02410 837 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 ZBTB16Q05516 673 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 SCAPQ12770 1279 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 TEAD4Q15561 434 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 ZC3H12AQ5D1E8 599 aaKnown RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 KCNT1Q5JUK3 1230 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 ADAT2Q7Z6V5 191 aaKnown RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 MARCH9Q86YJ5 346 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 CCDC117Q8IWD4 279 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 FIBINQ8TAL6 211 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 SLC39A13Q96H72 371 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 SLC6A18Q96N87 628 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 DDX50Q9BQ39 737 aaKnown RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 SRRTQ9BXP5 876 aaKnown RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 RSPH9Q9H1X1 276 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 UBE2TQ9NPD8 197 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-213ENST00000641272 SUN2Q9UH99 717 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 ANKRD6Q9Y2G4 727 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 ZFYVE26Q68DK2 2539 aa17.3■□□□□ 0.36
PHGDH-213ENST00000641272 H0Y8X5 98 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 FLRT2O43155 660 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 SART1O43290 800 aaKnown RBP17.29■□□□□ 0.36
PHGDH-213ENST00000641272 RNASEH2AO75792 299 aaKnown RBP17.29■□□□□ 0.36
PHGDH-213ENST00000641272 ASLP04424 464 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 IGHV4-34P06331 123 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 ZNF883P0CG24 379 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 TACR2P21452 398 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 USP8P40818 1118 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 ACADSBP45954 432 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 GRIA4P48058 902 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 NNTQ13423 1086 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 TAF5Q15542 800 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 CST6Q15828 149 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 HNRNPA1L2Q32P51 320 aaKnown RBP17.29■□□□□ 0.36
PHGDH-213ENST00000641272 KIAA0895LQ68EN5 471 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 CREBRFQ8IUR6 639 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 PASD1Q8IV76 773 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 MMAAQ8IVH4 418 aaKnown RBP17.29■□□□□ 0.36
PHGDH-213ENST00000641272 APCDD1Q8J025 514 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 ZNF557Q8N988 423 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-213ENST00000641272 BAHD1Q8TBE0 780 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-213ENST00000641272 RHBDD1Q8TEB9 315 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 TTC17Q96AE7 1141 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 RPL10LQ96L21 214 aaKnown RBP17.29■□□□□ 0.36
PHGDH-213ENST00000641272 FAM204AQ9H8W3 233 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 SGK2Q9HBY8 427 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 FBXL12Q9NXK8 326 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 ERVW-1Q9UQF0 538 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 KNL1Q8NG31 2342 aa17.29■□□□□ 0.36
PHGDH-213ENST00000641272 TAF4O00268 1085 aa17.28■□□□□ 0.36
PHGDH-213ENST00000641272 HOXB3P14651 431 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms