RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 SYDE1Q6ZW31 735 aaPredicted RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 OSTM1Q86WC4 334 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 TGS1Q96RS0 853 aaKnown RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 EBF3Q9H4W6 596 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 PLGRKTQ9HBL7 147 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 GBA2Q9HCG7 927 aaPredicted RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 ANGPTL2Q9UKU9 493 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 NUMBLQ9Y6R0 609 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 ZNF638Q14966 1978 aaKnown RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 LOC105371267A0A1B0GV96 52 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 H7C0C1 242 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 TRMUO75648 421 aaKnown RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 TRUB2O95900 331 aaKnown RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 TFPTP0C1Z6 253 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 P4HA1P13674 534 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 GPD1P21695 349 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 PRKACBP22694 351 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 RPL22P35268 128 aaKnown RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 ATP5OP48047 213 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 GTF2A2P52657 109 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 TUBA4AP68366 448 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 KRT81Q14533 505 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 C16orf72Q14CZ0 275 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 PKN2Q16513 984 aaKnown RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 DARS2Q6PI48 645 aaKnown RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 PLEKHH3Q7Z736 793 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 ZCCHC9Q8N567 271 aaKnown RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 PPP1R14CQ8TAE6 165 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 STMN4Q9H169 189 aaPredicted RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 LHX5Q9H2C1 402 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 ASB7Q9H672 318 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 TLE6Q9H808 572 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 DDX56Q9NY93 547 aaKnown RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 PPME1Q9Y570 386 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 MEIS3P2A8K0S8 358 aa12.71□□□□□ -0.37
SPIN3-236ENST00000640131 TRAFD1O14545 582 aaPredicted RBP12.71□□□□□ -0.37
SPIN3-236ENST00000640131 TMEM63AO94886 807 aa12.71□□□□□ -0.37
SPIN3-236ENST00000640131 PABPC1P11940 636 aaKnown RBP12.71□□□□□ -0.37
SPIN3-236ENST00000640131 RCVRNP35243 200 aa12.71□□□□□ -0.37
SPIN3-236ENST00000640131 RNASEH2BQ5TBB1 312 aaKnown RBP12.71□□□□□ -0.37
SPIN3-236ENST00000640131 RAVER1Q8IY67 606 aaKnown RBP12.71□□□□□ -0.37
SPIN3-236ENST00000640131 CCDC110Q8TBZ0 833 aa12.71□□□□□ -0.37
SPIN3-236ENST00000640131 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.71□□□□□ -0.37
SPIN3-236ENST00000640131 FAM172AQ8WUF8 416 aa12.71□□□□□ -0.37
SPIN3-236ENST00000640131 TRIM56Q9BRZ2 755 aaKnown RBP12.71□□□□□ -0.37
SPIN3-236ENST00000640131 TMPRSS4Q9NRS4 437 aa12.71□□□□□ -0.37
SPIN3-236ENST00000640131 TRNAU1APQ9NX07 287 aaKnown RBP12.71□□□□□ -0.37
SPIN3-236ENST00000640131 MOSPD1Q9UJG1 213 aa12.71□□□□□ -0.37
SPIN3-236ENST00000640131 ARIH1Q9Y4X5 557 aaPredicted RBP12.71□□□□□ -0.37
SPIN3-236ENST00000640131 MRPL42Q9Y6G3 142 aaKnown RBP12.71□□□□□ -0.37
SPIN3-236ENST00000640131 A0A1W2PPM1 405 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 WDR91A4D1P6 747 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 CFAP69A5D8W1 941 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 NDC80O14777 642 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 S100BP04271 92 aaPredicted RBP12.71□□□□□ -0.38
SPIN3-236ENST00000640131 KRT7P08729 469 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 RPL5P46777 297 aaKnown RBP12.71□□□□□ -0.38
SPIN3-236ENST00000640131 CDC16Q13042 620 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 MED21Q13503 144 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 IL23RQ5VWK5 629 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 NLRP9Q7RTR0 991 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 CTU1Q7Z7A3 348 aaKnown RBP12.71□□□□□ -0.38
SPIN3-236ENST00000640131 CKAP2Q8WWK9 683 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 CPT1BQ92523 772 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 ZFP42Q96MM3 310 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 MIPEPQ99797 713 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 RRAGCQ9HB90 399 aa12.71□□□□□ -0.38
SPIN3-236ENST00000640131 C6orf203Q9P0P8 240 aaPredicted RBP12.71□□□□□ -0.38
SPIN3-236ENST00000640131 PRPSAP2O60256 369 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 CNOT3O75175 753 aaKnown RBP12.7□□□□□ -0.38
SPIN3-236ENST00000640131 GABBR2O75899 941 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 CTSHP09668 335 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 OCM2P0CE71 109 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 OCMP0CE72 109 aaPredicted RBP12.7□□□□□ -0.38
SPIN3-236ENST00000640131 FGFR1P11362 822 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 TAP1Q03518 808 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 GRM2Q14416 872 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 MTFR1Q15390 333 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 FAM187BQ17R55 369 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 TLK2Q86UE8 772 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 DCLK2Q8N568 766 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 SLC35B2Q8TB61 432 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 PYROXD1Q8WU10 500 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 SERPINB12Q96P63 405 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 CADM1Q9BY67 442 aaKnown RBP12.7□□□□□ -0.38
SPIN3-236ENST00000640131 ABHD16BQ9H3Z7 469 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 ALG13Q9NP73 1137 aaKnown RBP12.7□□□□□ -0.38
SPIN3-236ENST00000640131 PIH1D1Q9NWS0 290 aaKnown RBP12.7□□□□□ -0.38
SPIN3-236ENST00000640131 MFHAS1Q9Y4C4 1052 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 TLL2Q9Y6L7 1015 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 CLDN5O00501 218 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 HMGCRP04035 888 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 HSPA1AP0DMV8 641 aaKnown RBP12.7□□□□□ -0.38
SPIN3-236ENST00000640131 HSPA1BP0DMV9 641 aaKnown RBP12.7□□□□□ -0.38
SPIN3-236ENST00000640131 CHRNB1P11230 501 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 POLR2EP19388 210 aaKnown RBP12.7□□□□□ -0.38
SPIN3-236ENST00000640131 GCAP28676 217 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 STX2P32856 288 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 PCYT1AP49585 367 aa12.7□□□□□ -0.38
SPIN3-236ENST00000640131 SOX4Q06945 474 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms