RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 FAM102AQ5T9C2 384 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-207ENST00000639857 PEAR1Q5VY43 1037 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-207ENST00000639857 RAP1GAP2Q684P5 730 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 SORCS1Q8WY21 1168 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 RNF34Q969K3 372 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 PCMTD1Q96MG8 357 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-207ENST00000639857 KIAA1522Q9P206 1035 aaPredicted RBP18.31■□□□□ 0.52
PTPN11-207ENST00000639857 STIM2Q9P246 746 aa18.31■□□□□ 0.52
PTPN11-207ENST00000639857 USP36Q9P275 1121 aaKnown RBP18.31■□□□□ 0.52
PTPN11-207ENST00000639857 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.3■□□□□ 0.52
PTPN11-207ENST00000639857 A0A1B0GVM2 712 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 TCAF2A6NFQ2 919 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 IGLV3-19P01714 112 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 EPHX1P07099 455 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 FMO1Q01740 532 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 RPL6Q02878 288 aaKnown RBP18.3■□□□□ 0.52
PTPN11-207ENST00000639857 LMAN2Q12907 356 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 ARID5BQ14865 1188 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 SLC25A52Q3SY17 297 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 OTUD1Q5VV17 481 aaPredicted RBP18.3■□□□□ 0.52
PTPN11-207ENST00000639857 NAA35Q5VZE5 725 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 LYSMD4Q5XG99 296 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 KIAA1324Q6UXG2 1013 aaKnown RBP18.3■□□□□ 0.52
PTPN11-207ENST00000639857 SND1Q7KZF4 910 aaKnown RBP eCLIP18.3■□□□□ 0.52
PTPN11-207ENST00000639857 DGLUCYQ7Z3D6 616 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 CARNMT1Q8N4J0 409 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 OR2T3Q8NH03 318 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 PRCCQ92733 491 aaPredicted RBP18.3■□□□□ 0.52
PTPN11-207ENST00000639857 MYEOVQ96EZ4 313 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 PPP1R9BQ96SB3 815 aa18.3■□□□□ 0.52
PTPN11-207ENST00000639857 MKRN2Q9H000 416 aaKnown RBP18.3■□□□□ 0.52
PTPN11-207ENST00000639857 EVLQ9UI08 416 aaPredicted RBP18.3■□□□□ 0.52
PTPN11-207ENST00000639857 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 H0Y626 953 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 SRPRAP08240 638 aaKnown RBP18.29■□□□□ 0.52
PTPN11-207ENST00000639857 CCDC172P0C7W6 258 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 ATP1A3P13637 1013 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 MMP8P22894 467 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 OXTRP30559 389 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 CXCR3P49682 368 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 ZNF165P49910 485 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 COPAP53621 1224 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 GSCP56915 257 aaPredicted RBP18.29■□□□□ 0.52
PTPN11-207ENST00000639857 NME3Q13232 169 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 SF3A2Q15428 464 aaKnown RBP18.29■□□□□ 0.52
PTPN11-207ENST00000639857 RABEPKQ7Z6M1 372 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 TMPRSS6Q8IU80 811 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 SYT12Q8IV01 421 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 DHX40Q8IX18 779 aaKnown RBP18.29■□□□□ 0.52
PTPN11-207ENST00000639857 TMEFF1Q8IYR6 380 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 CFAP52Q8N1V2 620 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 CYB5D2Q8WUJ1 264 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 SLC20A1Q8WUM9 679 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 CPA5Q8WXQ8 436 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 SIPA1Q96FS4 1042 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 FUCA2Q9BTY2 467 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 ITM2CQ9NQX7 267 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 ARHGEF38Q9NXL2 777 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 SUN2Q9UH99 717 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 TMEM59LQ9UK28 342 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 MYO6Q9UM54 1294 aa18.29■□□□□ 0.52
PTPN11-207ENST00000639857 SYNJ2BP-COX16A0A087WUM0 186 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 KHNYNO15037 678 aaKnown RBP18.28■□□□□ 0.52
PTPN11-207ENST00000639857 CHRNB2P17787 502 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 CD6P30203 668 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 CSKP41240 450 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 SULT1E1P49888 294 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 ATXN1P54253 815 aaKnown RBP18.28■□□□□ 0.52
PTPN11-207ENST00000639857 ST8SIA6P61647 398 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 CENPCQ03188 943 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 ZBTB16Q05516 673 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 AUHQ13825 339 aaKnown RBP18.28■□□□□ 0.52
PTPN11-207ENST00000639857 CCDC6Q16204 474 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 C5orf22Q49AR2 442 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 PITRM1Q5JRX3 1037 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 BNIPLQ7Z465 357 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 CCAR2Q8N163 923 aaKnown RBP18.28■□□□□ 0.52
PTPN11-207ENST00000639857 FRMD1Q8N878 549 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 FOXJ1Q92949 421 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 WDCPQ9H6R7 721 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 PIGVQ9NUD9 493 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 COX16Q9P0S2 106 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 INTS6Q9UL03 887 aaKnown RBP18.28■□□□□ 0.52
PTPN11-207ENST00000639857 CYP8B1Q9UNU6 501 aa18.28■□□□□ 0.52
PTPN11-207ENST00000639857 ITIH6Q6UXX5 1313 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 NDUFS2O75306 463 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 PAGE1O75459 146 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 ACADMP11310 421 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 UNGP13051 313 aaPredicted RBP18.27■□□□□ 0.52
PTPN11-207ENST00000639857 FLT3P36888 993 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 PTGER3P43115 390 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 PLK1P53350 603 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 RNASE9P60153 205 aaKnown RBP18.27■□□□□ 0.52
PTPN11-207ENST00000639857 DEUP1Q05D60 604 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 SULT2A1Q06520 285 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 PLEKHG6Q3KR16 790 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 FILIP1LQ4L180 1135 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 FSCBQ5H9T9 825 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 FBXL22Q6P050 247 aa18.27■□□□□ 0.52
PTPN11-207ENST00000639857 CEP76Q8TAP6 659 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms