RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 NDRG1Q92597 394 aaKnown RBP14.74□□□□□ -0.05
SCARB2-216ENST00000639300 PCDH18Q9HCL0 1135 aa14.74□□□□□ -0.05
SCARB2-216ENST00000639300 VPS28Q9UK41 221 aa14.74□□□□□ -0.05
SCARB2-216ENST00000639300 HACD1B0YJ81 288 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 B4GALT4O60513 344 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 ALDH2P05091 517 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 AKR1A1P14550 325 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 AXLP30530 894 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 NPY2RP49146 381 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 LRRC74AQ0VAA2 488 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 DYNC1I2Q13409 638 aaKnown RBP14.73□□□□□ -0.05
SCARB2-216ENST00000639300 SPANXN3Q5MJ09 141 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 ZNF280DQ6N043 979 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 TMC7Q7Z402 723 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 TTC30AQ86WT1 665 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 PSTKQ8IV42 348 aaKnown RBP14.73□□□□□ -0.05
SCARB2-216ENST00000639300 APBB2Q92870 758 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 CPNE1Q99829 537 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 EBNA1BP2Q99848 306 aaKnown RBP14.73□□□□□ -0.05
SCARB2-216ENST00000639300 BRD8Q9H0E9 1235 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 RRN3Q9NYV6 651 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 BTBD7Q9P203 1132 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 SCAMP3O14828 347 aaKnown RBP14.73□□□□□ -0.05
SCARB2-216ENST00000639300 ZMPSTE24O75844 475 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 SMIM10L2AP0DMW4 78 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 SMIM10L2BP0DMW5 78 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 DNAJB2P25686 324 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 SLC39A12Q504Y0 691 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 KYAT3Q6YP21 454 aaKnown RBP14.73□□□□□ -0.05
SCARB2-216ENST00000639300 TNS4Q8IZW8 715 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 ELOVL4Q9GZR5 314 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 SAR1AQ9NR31 198 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 TMEM51Q9NW97 253 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 CCDC167Q9P0B6 97 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 BAIAP3O94812 1187 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 NFKB1P19838 968 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 SLC34A1Q06495 639 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 NBPF20Q3BBV1 942 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 NEPROQ6NW34 567 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 CARNMT1Q8N4J0 409 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 DIS3LQ8TF46 1054 aaKnown RBP14.73□□□□□ -0.05
SCARB2-216ENST00000639300 CERS2Q96G23 380 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 C17orf80Q9BSJ5 609 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 DYRK4Q9NR20 520 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 MAN1C1Q9NR34 630 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 IRAK4Q9NWZ3 460 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 GGA2Q9UJY4 613 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 EGFRP00533 1210 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 SERPIND1P05546 499 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 RHOCP08134 193 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 MBL2P11226 248 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-216ENST00000639300 HOXD13P35453 343 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 ARL2P36404 184 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 CCDC153Q494R4 210 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 CDRT15Q96T59 188 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 TRPM5Q9NZQ8 1165 aa14.73□□□□□ -0.05
SCARB2-216ENST00000639300 ZNF214Q9UL59 606 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-216ENST00000639300 HEATR9A2RTY3 570 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 SLCO1B7G3V0H7 640 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 KIF1CO43896 1103 aaKnown RBP14.72□□□□□ -0.05
SCARB2-216ENST00000639300 FKBP6O75344 327 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 ITGB6P18564 788 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 CDKN2BP42772 138 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 SLC25A3Q00325 362 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 CRYMQ14894 314 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 SLC1A5Q15758 541 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 SYTL3Q4VX76 610 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 VPS50Q96JG6 964 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 FAR2Q96K12 515 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 CDHR5Q9HBB8 845 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 NMRK2Q9NPI5 230 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 PRPF4O43172 522 aaKnown RBP eCLIP14.72□□□□□ -0.05
SCARB2-216ENST00000639300 PKNOX1P55347 436 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 HDAC4P56524 1084 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 SREBF2Q12772 1141 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 GRAMD4Q6IC98 578 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 PCSK9Q8NBP7 692 aaKnown RBP14.72□□□□□ -0.05
SCARB2-216ENST00000639300 DDI1Q8WTU0 396 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 NTPCRQ9BSD7 190 aaKnown RBP14.72□□□□□ -0.05
SCARB2-216ENST00000639300 RNPEPL1Q9HAU8 725 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 GRHL1Q9NZI5 618 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 TUBGCP4Q9UGJ1 667 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 ZSCAN9O15535 394 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-216ENST00000639300 FAM155BO75949 473 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 MPOP05164 745 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 PTGIRP43119 386 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 TAF5Q15542 800 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 ZNF786Q8N393 782 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 PYDC1Q8WXC3 89 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 ZNF670Q9BS34 389 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 TBC1D13Q9NVG8 400 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 PCDHB5Q9Y5E4 795 aa14.72□□□□□ -0.05
SCARB2-216ENST00000639300 PRRC2BQ5JSZ5 2229 aaKnown RBP14.72□□□□□ -0.05
SCARB2-216ENST00000639300 CFAP99D6REC4 459 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 EDF1O60869 148 aaKnown RBP14.71□□□□□ -0.05
SCARB2-216ENST00000639300 HSPA1AP0DMV8 641 aaKnown RBP14.71□□□□□ -0.05
SCARB2-216ENST00000639300 HSPA1BP0DMV9 641 aaKnown RBP14.71□□□□□ -0.05
SCARB2-216ENST00000639300 ADCK2Q7Z695 626 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 CMC1Q7Z7K0 106 aa14.71□□□□□ -0.05
SCARB2-216ENST00000639300 CEP19Q96LK0 163 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms