RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 DCUN1D1Q96GG9 259 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 LENG8Q96PV6 779 aaPredicted RBP11.2□□□□□ -0.62
SNIP1-204ENST00000638725 BTBD9Q96Q07 612 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 OR52B2Q96RD2 323 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 KCNK16Q96T55 309 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 CDH19Q9H159 772 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 TXNDC16Q9P2K2 825 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 ZNF112Q9UJU3 913 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 PCDHGB4Q9UN71 923 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 PCDHB12Q9Y5F1 795 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 PCDHGB5Q9Y5G0 923 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 PTPRFP10586 1907 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 GOLGA8QA0A0J9YX86 632 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 GOLGA8OA6NCC3 632 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 GOLGA8NF8WBI6 632 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 NOP56O00567 594 aaKnown RBP11.19□□□□□ -0.62
SNIP1-204ENST00000638725 AIM2O14862 343 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 PEX1O43933 1283 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 MLNP12872 115 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 ZFXP17010 805 aaPredicted RBP11.19□□□□□ -0.62
SNIP1-204ENST00000638725 EDNRBP24530 442 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 SERPINB5P36952 375 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 ABCG1P45844 678 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 GTF2A2P52657 109 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 INSCQ1MX18 579 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 PKDCCQ504Y2 493 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 FSCBQ5H9T9 825 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 ARMC3Q5W041 872 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 EPGNQ6UW88 154 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 PQLC1Q8N2U9 271 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 DCLK2Q8N568 766 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 MOCOSQ96EN8 888 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 MRPL45Q9BRJ2 306 aaKnown RBP11.19□□□□□ -0.62
SNIP1-204ENST00000638725 RTKNQ9BST9 563 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 SLC4A5Q9BY07 1137 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 ACSS2Q9NR19 701 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 SMIM31A0A1B0GVY4 71 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 ZNF487B1APH4 448 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 MFSD11O43934 449 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 DGKIO75912 1065 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 DESP17661 470 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 PSMB4P28070 264 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 PMLP29590 882 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 GP5P40197 560 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 NR2C2P49116 596 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 NUDT2P50583 147 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 ZNF280AP59817 542 aaPredicted RBP11.19□□□□□ -0.62
SNIP1-204ENST00000638725 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.19□□□□□ -0.62
SNIP1-204ENST00000638725 LRRC23Q53EV4 343 aaPredicted RBP11.19□□□□□ -0.62
SNIP1-204ENST00000638725 PPM1LQ5SGD2 360 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 TMEM110Q86TL2 294 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 SLC35F5Q8WV83 523 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 DTNBP1Q96EV8 351 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 MPP4Q96JB8 637 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 PPP1R36Q96LQ0 422 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 PDZD7Q9H5P4 517 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 ASB7Q9H672 318 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 UBAP1Q9NZ09 502 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 SEPT10Q9P0V9 454 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 G3BP2Q9UN86 482 aaKnown RBP11.19□□□□□ -0.62
SNIP1-204ENST00000638725 PSMD13Q9UNM6 376 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 SSX2IPQ9Y2D8 614 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 NME7Q9Y5B8 376 aa11.19□□□□□ -0.62
SNIP1-204ENST00000638725 RNF103O00237 685 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 AP1G1O43747 822 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 FBXO21O94952 628 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 PRDX6P30041 224 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 MSX2P35548 267 aaPredicted RBP11.18□□□□□ -0.62
SNIP1-204ENST00000638725 IGBP1P78318 339 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 MRPS22P82650 360 aaKnown RBP11.18□□□□□ -0.62
SNIP1-204ENST00000638725 IRF9Q00978 393 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 R3HDM1Q15032 1099 aaKnown RBP11.18□□□□□ -0.62
SNIP1-204ENST00000638725 DLG2Q15700 870 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 SOWAHAQ2M3V2 549 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 CERS2Q96G23 380 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 R3HDMLQ9H3Y0 253 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 DPP3Q9NY33 737 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 GGA3Q9NZ52 723 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 KIAA1257Q9ULG3 409 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 CDY2AQ9Y6F7 541 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 CDY1Q9Y6F8 540 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 RPS6KL1Q9Y6S9 549 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 LOC285556D6RIA3 1793 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 EVPLQ92817 2033 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 NEMP1O14524 444 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 MCF2P10911 925 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 RPL26P61254 145 aaKnown RBP11.18□□□□□ -0.62
SNIP1-204ENST00000638725 TTLL12Q14166 644 aaPredicted RBP11.18□□□□□ -0.62
SNIP1-204ENST00000638725 SNX32Q86XE0 403 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 MARVELD2Q8N4S9 558 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 PIP4K2CQ8TBX8 421 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 COPS5Q92905 334 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 PRICKLE1Q96MT3 831 aaPredicted RBP11.18□□□□□ -0.62
SNIP1-204ENST00000638725 FCRL3Q96P31 734 aaPredicted RBP11.18□□□□□ -0.62
SNIP1-204ENST00000638725 PDGFDQ9GZP0 370 aaPredicted RBP11.18□□□□□ -0.62
SNIP1-204ENST00000638725 WDR55Q9H6Y2 383 aaPredicted RBP11.18□□□□□ -0.62
SNIP1-204ENST00000638725 CAB39LQ9H9S4 337 aa11.18□□□□□ -0.62
SNIP1-204ENST00000638725 PRMT7Q9NVM4 692 aaPredicted RBP11.18□□□□□ -0.62
SNIP1-204ENST00000638725 USP3Q9Y6I4 520 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms