RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 UGP2Q16851 508 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 CYP2R1Q6VVX0 501 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 CNPPD1Q9BV87 410 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 UBXN6Q9BZV1 441 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 USP15Q9Y4E8 981 aaPredicted RBP17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 PCDHB2Q9Y5E7 798 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 CLTCL1P53675 1640 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 CHRNB3Q05901 458 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 AASDHQ4L235 1098 aaPredicted RBP17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 MFSD7Q6UXD7 560 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 GHDCQ8N2G8 530 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 ZNF366Q8N895 744 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 TRAPPC12Q8WVT3 735 aa17.33■□□□□ 0.37
CACNA1A-253ENST00000637927 IGF2BP3O00425 579 aaKnown RBP eCLIP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 ANXA11P50995 505 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 BMPR2Q13873 1038 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 AGKQ53H12 422 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 KLHDC7AQ5VTJ3 777 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 SMYD1Q8NB12 490 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 CD248Q9HCU0 757 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 PCDH12Q9NPG4 1184 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 EQTNQ9NQ60 294 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 AGTP01019 485 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 ALDH2P05091 517 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 CXCL8P10145 99 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 TBX2Q13207 712 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 NAPEPLDQ6IQ20 393 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 CORO1BQ9BR76 489 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 ZDHHC9Q9Y397 364 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 DDNO94850 711 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 GHRP10912 638 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 OR1E1P30953 314 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 CENPCQ03188 943 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 GLT6D1Q7Z4J2 308 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 PEG10Q86TG7 708 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 FBXO36Q8NEA4 188 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 GBA2Q9HCG7 927 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 NYAP2Q9P242 653 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 CCDC163A0A0D9SF12 145 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 CNOT3O75175 753 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 FARP2O94887 1054 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 SEC24CP53992 1094 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 PFKPQ01813 784 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 RAD9BQ6WBX8 426 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 CMTM5Q96DZ9 223 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 DDX43Q9NXZ2 648 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 LIMD1Q9UGP4 676 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 KIAA1257Q9ULG3 409 aa17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 NDRG2Q9UN36 371 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 GPC6Q9Y625 555 aaPredicted RBP17.33■□□□□ 0.36
CACNA1A-253ENST00000637927 THP07101 528 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 NDUFV1P49821 464 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 OASLQ15646 514 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 TMED8Q6PL24 325 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 TMEM79Q9BSE2 394 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 NR1I3Q14994 352 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 NEK5Q6P3R8 708 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 FAM129CQ86XR2 697 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 ZNF280BQ86YH2 543 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 CBWD1Q9BRT8 395 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 AGPAT3Q9NRZ7 376 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 LRRC4BQ9NT99 713 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 DUSP10Q9Y6W6 482 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 IQSEC2Q5JU85 1478 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 ALKQ9UM73 1620 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 KPNA5O15131 536 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 GLP2RO95838 553 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 PRG2P13727 222 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 FUT4P22083 530 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 EIF2B2P49770 351 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 BCAP31P51572 246 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 OR2L5Q8NG80 312 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 KLHL32Q96NJ5 620 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 GRID1Q9ULK0 1009 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 SPEF1Q9Y4P9 236 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 TGM3Q08188 693 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 FAM9CQ8IZT9 166 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 GRAMD1AQ96CP6 724 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 CCT8L2Q96SF2 557 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 PON1P27169 355 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 SMG5Q9UPR3 1016 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 PCDHA11Q9Y5I1 949 aa17.32■□□□□ 0.36
CACNA1A-253ENST00000637927 SMAD9O15198 467 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 INPP4BO15327 924 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 TNFRSF21O75509 655 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 RHOBTB3O94955 611 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 PPP2R1BP30154 601 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 HNMTP50135 292 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 ZNF544Q6NX49 715 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 ADM5C9JUS6 153 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 PDHXO00330 501 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 ZNF432O94892 652 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 ANTXR2P58335 489 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 PRAMEF19Q5SWL8 479 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 FBXL19Q6PCT2 694 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 LGI2Q8N0V4 545 aa17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 ZNF483Q8TF39 744 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-253ENST00000637927 SPATA31A1Q5TZJ5 1347 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms