RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 GLRX5Q86SX6 157 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 TMEM110Q86TL2 294 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 TAC4Q86UU9 113 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 CARNMT1Q8N4J0 409 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 KDM1BQ8NB78 822 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 ZNF606Q8WXB4 792 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 MRGPRX3Q96LB0 322 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 TRIM62Q9BVG3 475 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 RSPH9Q9H1X1 276 aaPredicted RBP19.14■□□□□ 0.65
CLN6-220ENST00000637450 MTG2Q9H4K7 406 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 SGK2Q9HBY8 427 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 TM7SF3Q9NS93 570 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 CYTH4Q9UIA0 394 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 FNDC3AQ9Y2H6 1198 aaKnown RBP19.14■□□□□ 0.65
CLN6-220ENST00000637450 KNL1Q8NG31 2342 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 CAPN9O14815 690 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 PAPSS1O43252 624 aaPredicted RBP19.13■□□□□ 0.65
CLN6-220ENST00000637450 MED7O43513 233 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 LETM1O95202 739 aaPredicted RBP19.13■□□□□ 0.65
CLN6-220ENST00000637450 ST8SIA6P61647 398 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 ARID5BQ14865 1188 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 HNRNPA1L2Q32P51 320 aaKnown RBP19.13■□□□□ 0.65
CLN6-220ENST00000637450 TTC31Q49AM3 519 aaPredicted RBP19.13■□□□□ 0.65
CLN6-220ENST00000637450 DCAF6Q58WW2 860 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 FSCBQ5H9T9 825 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 CCDC117Q8IWD4 279 aaPredicted RBP19.13■□□□□ 0.65
CLN6-220ENST00000637450 CFAP52Q8N1V2 620 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 SETD7Q8WTS6 366 aaKnown RBP19.13■□□□□ 0.65
CLN6-220ENST00000637450 ADAMTS14Q8WXS8 1223 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 ZCCHC14Q8WYQ9 949 aaKnown RBP19.13■□□□□ 0.65
CLN6-220ENST00000637450 BIRC7Q96CA5 298 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 POPDC2Q9HBU9 364 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 XPO7Q9UIA9 1087 aaKnown RBP19.13■□□□□ 0.65
CLN6-220ENST00000637450 SCML1Q9UN30 329 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 PCDHGB2Q9Y5G2 931 aa19.13■□□□□ 0.65
CLN6-220ENST00000637450 NUMA1Q14980 2115 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 SRRM3A6NNA2 597 aaPredicted RBP19.12■□□□□ 0.65
CLN6-220ENST00000637450 SIN3BO75182 1162 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 FGFR1OPO95684 399 aaKnown RBP19.12■□□□□ 0.65
CLN6-220ENST00000637450 MOCS2O96007 188 aaPredicted RBP19.12■□□□□ 0.65
CLN6-220ENST00000637450 CD27P26842 260 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 YWHAZP63104 245 aaKnown RBP19.12■□□□□ 0.65
CLN6-220ENST00000637450 CDH18Q13634 790 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 KIF19Q2TAC6 998 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 ZC3H12AQ5D1E8 599 aaKnown RBP19.12■□□□□ 0.65
CLN6-220ENST00000637450 PITRM1Q5JRX3 1037 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 MMS22LQ6ZRQ5 1243 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 USP30Q70CQ3 517 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 ENOSF1Q7L5Y1 443 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 PNPLA1Q8N8W4 532 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 MED15Q96RN5 788 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 PABPC3Q9H361 631 aaKnown RBP19.12■□□□□ 0.65
CLN6-220ENST00000637450 TM9SF3Q9HD45 589 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 ACP6Q9NPH0 428 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 ERVW-1Q9UQF0 538 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 NCKAP1Q9Y2A7 1128 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 FREM2Q5SZK8 3169 aa19.12■□□□□ 0.65
CLN6-220ENST00000637450 MUC22E2RYF6 1773 aaPredicted RBP19.11■□□□□ 0.65
CLN6-220ENST00000637450 E5RJQ4 531 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 FSBPO95073 299 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 LUC7L3O95232 432 aaKnown RBP19.11■□□□□ 0.65
CLN6-220ENST00000637450 TRUB2O95900 331 aaKnown RBP19.11■□□□□ 0.65
CLN6-220ENST00000637450 IGLV3-25P01717 112 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 SRPRAP08240 638 aaKnown RBP19.11■□□□□ 0.65
CLN6-220ENST00000637450 TACR2P21452 398 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 GRIA4P48058 902 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 EIF4EBP2Q13542 120 aaPredicted RBP19.11■□□□□ 0.65
CLN6-220ENST00000637450 TEAD4Q15561 434 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 C9orf64Q5T6V5 341 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 SLCO6A1Q86UG4 719 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 LGI2Q8N0V4 545 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 BAHD1Q8TBE0 780 aaPredicted RBP19.11■□□□□ 0.65
CLN6-220ENST00000637450 BTN2A3PQ96KV6 586 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 ORAI3Q9BRQ5 295 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 THAP9Q9H5L6 903 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 KIAA1522Q9P206 1035 aaPredicted RBP19.11■□□□□ 0.65
CLN6-220ENST00000637450 RALYQ9UKM9 306 aaKnown RBP19.11■□□□□ 0.65
CLN6-220ENST00000637450 APOBEC2Q9Y235 224 aaKnown RBP19.11■□□□□ 0.65
CLN6-220ENST00000637450 ANKRD6Q9Y2G4 727 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 SNX11Q9Y5W9 270 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 LAMA5O15230 3695 aa19.11■□□□□ 0.65
CLN6-220ENST00000637450 TARSL2A2RTX5 802 aaKnown RBP19.1■□□□□ 0.65
CLN6-220ENST00000637450 TTC34A8MYJ7 566 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 THAP12O43422 761 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 RNASEH1O60930 286 aaKnown RBP19.1■□□□□ 0.65
CLN6-220ENST00000637450 MOCS3O95396 460 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 APOEP02649 317 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 CAPNS1P04632 268 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 GNA15P30679 374 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 CTSOP43234 321 aaPredicted RBP19.1■□□□□ 0.65
CLN6-220ENST00000637450 ECT2LQ008S8 904 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 SUZ12Q15022 739 aaKnown RBP19.1■□□□□ 0.65
CLN6-220ENST00000637450 RAP1GAP2Q684P5 730 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 GJB7Q6PEY0 223 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 TRIM65Q6PJ69 517 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 DHX40Q8IX18 779 aaKnown RBP19.1■□□□□ 0.65
CLN6-220ENST00000637450 GANCQ8TET4 914 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 FAM81BQ96LP2 452 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 CRACR2AQ9BSW2 395 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 FBXL12Q9NXK8 326 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms