RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 SORCS1Q8WY21 1168 aa19.05■□□□□ 0.64
CLN6-214ENST00000636314 SLC2A13Q96QE2 648 aa19.05■□□□□ 0.64
CLN6-214ENST00000636314 STK33Q9BYT3 514 aa19.05■□□□□ 0.64
CLN6-214ENST00000636314 NUCKS1Q9H1E3 243 aaKnown RBP19.05■□□□□ 0.64
CLN6-214ENST00000636314 GANQ9H2C0 597 aa19.05■□□□□ 0.64
CLN6-214ENST00000636314 DDIT4Q9NX09 232 aa19.05■□□□□ 0.64
CLN6-214ENST00000636314 STIM2Q9P246 746 aa19.05■□□□□ 0.64
CLN6-214ENST00000636314 SLC6A14Q9UN76 642 aa19.05■□□□□ 0.64
CLN6-214ENST00000636314 CACNA1EQ15878 2313 aa19.05■□□□□ 0.64
CLN6-214ENST00000636314 ZFYVE26Q68DK2 2539 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 SYNJ2BP-COX16A0A087WUM0 186 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 SYNCRIPO60506 623 aaKnown RBP19.04■□□□□ 0.64
CLN6-214ENST00000636314 OPHN1O60890 802 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 ZNF217O75362 1048 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 DAB1O75553 588 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 RDXP35241 583 aaKnown RBP19.04■□□□□ 0.64
CLN6-214ENST00000636314 HOXD12P35452 270 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 KLK7P49862 253 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 COPB1P53618 953 aaKnown RBP19.04■□□□□ 0.64
CLN6-214ENST00000636314 ENPP2Q13822 863 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 FUT11Q495W5 492 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 ZC3H12AQ5D1E8 599 aaKnown RBP19.04■□□□□ 0.64
CLN6-214ENST00000636314 MS4A13Q5J8X5 152 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 PEAR1Q5VY43 1037 aaPredicted RBP19.04■□□□□ 0.64
CLN6-214ENST00000636314 SERPINA13PQ6UXR4 307 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 SLC36A4Q6YBV0 504 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 CHSY1Q86X52 802 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 CCDC117Q8IWD4 279 aaPredicted RBP19.04■□□□□ 0.64
CLN6-214ENST00000636314 ATP6V0D2Q8N8Y2 350 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 WFDC5Q8TCV5 224 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 BTN2A3PQ96KV6 586 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 MRGPRX1Q96LB2 322 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 FAM207AQ9NSI2 230 aaPredicted RBP19.04■□□□□ 0.64
CLN6-214ENST00000636314 COX16Q9P0S2 106 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 MSRB2Q9Y3D2 182 aa19.04■□□□□ 0.64
CLN6-214ENST00000636314 DSPP15924 2871 aaKnown RBP19.04■□□□□ 0.64
CLN6-214ENST00000636314 NBEAQ8NFP9 2946 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 PRKCHP24723 683 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 CDH5P33151 784 aaPredicted RBP19.03■□□□□ 0.64
CLN6-214ENST00000636314 POLR2FP61218 127 aaKnown RBP19.03■□□□□ 0.64
CLN6-214ENST00000636314 RPS24P62847 133 aaKnown RBP19.03■□□□□ 0.64
CLN6-214ENST00000636314 SLC6A3Q01959 620 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 TYRO3Q06418 890 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 CDH18Q13634 790 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 FNDC3BQ53EP0 1204 aaKnown RBP19.03■□□□□ 0.64
CLN6-214ENST00000636314 SLC26A9Q7LBE3 791 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 NOP9Q86U38 636 aaKnown RBP19.03■□□□□ 0.64
CLN6-214ENST00000636314 ZDHHC17Q8IUH5 632 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 EPS8L1Q8TE68 723 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 RNF34Q969K3 372 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 PCMTD1Q96MG8 357 aaPredicted RBP19.03■□□□□ 0.64
CLN6-214ENST00000636314 SLC6A17Q9H1V8 727 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.03■□□□□ 0.64
CLN6-214ENST00000636314 TMEM63CQ9P1W3 806 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 SLC12A6Q9UHW9 1150 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 XPO7Q9UIA9 1087 aaKnown RBP19.03■□□□□ 0.64
CLN6-214ENST00000636314 CYP8B1Q9UNU6 501 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 LHX6Q9UPM6 363 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 DAAM1Q9Y4D1 1078 aa19.03■□□□□ 0.64
CLN6-214ENST00000636314 PKD1L2Q7Z442 2459 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 LGALS16A8MUM7 142 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 UPK3BL1B0FP48 263 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 UPK3BL2E5RIL1 263 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 LSM8O95777 96 aaKnown RBP19.02■□□□□ 0.64
CLN6-214ENST00000636314 EPHX1P07099 455 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 SERPINF2P08697 491 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 SLC2A3P11169 496 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 CDK11BP21127 795 aaKnown RBP19.02■□□□□ 0.64
CLN6-214ENST00000636314 ABCB4P21439 1286 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 CCR1P32246 355 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 CD70P32970 193 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 ZNF33AQ06730 810 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 RAP1GAP2Q684P5 730 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 MBLAC2Q68D91 279 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 RABEPKQ7Z6M1 372 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 ADIPOR2Q86V24 386 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 LGI2Q8N0V4 545 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 CARNMT1Q8N4J0 409 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 MINDY1Q8N5J2 469 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 AOPEPQ8N6M6 819 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 MSANTD4Q8NCY6 345 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 ZNF397Q8NF99 534 aaPredicted RBP19.02■□□□□ 0.64
CLN6-214ENST00000636314 OR2I1PQ8NGU4 316 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 CYB5D2Q8WUJ1 264 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 MYEOVQ96EZ4 313 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 SPAG5Q96R06 1193 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 PRDM16Q9HAZ2 1276 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 NLRC4Q9NPP4 1024 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 LIMA1Q9UHB6 759 aaKnown RBP19.02■□□□□ 0.64
CLN6-214ENST00000636314 PLA2G4CQ9UP65 541 aa19.02■□□□□ 0.64
CLN6-214ENST00000636314 IGHV1OR15-9A0A0B4J2B8 117 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 FAM170AA1A519 330 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 F5H5T6 163 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 H0Y626 953 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 GFPT2O94808 682 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 TRIM16O95361 564 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 ATP5BP06576 529 aaKnown RBP19.01■□□□□ 0.63
CLN6-214ENST00000636314 MMEP08473 750 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 POLR2EP19388 210 aaKnown RBP19.01■□□□□ 0.63
CLN6-214ENST00000636314 TACR2P21452 398 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms