RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 MS4A4AQ96JQ5 239 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SYTL2Q9HCH5 934 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SLC12A4Q9UP95 1085 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 UBOX5O94941 541 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 AP2A1O95782 977 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 CYP11A1P05108 521 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 CPB1P15086 417 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 CPA3P15088 417 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ADRA1DP25100 572 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PRAMEP78395 509 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 KIAA1841Q6NSI8 718 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 DENND5BQ6ZUT9 1274 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MRPL10Q7Z7H8 261 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PIWIL2Q8TC59 973 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 POP5Q969H6 163 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 GAD1Q99259 594 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 C20orf96Q9NUD7 363 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PCMTD2Q9NV79 361 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 NCKIPSDQ9NZQ3 722 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MAGEA11P43364 429 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 FAAP100Q0VG06 881 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ORC1Q13415 861 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SLC12A1Q13621 1099 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PKDCCQ504Y2 493 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SLC24A5Q71RS6 500 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PEX13Q92968 403 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 FGD4Q96M96 766 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TRIM15Q9C019 465 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 AAASQ9NRG9 546 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PLLPQ9Y342 182 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 A0A087X1B8 175 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 MAP3K7O43318 606 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 DDHD2O94830 711 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF865P0CJ78 1059 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 THRAP10827 490 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 ELF1P32519 619 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 CREMQ03060 361 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 ITKQ08881 620 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 ARMC2Q8NEN0 867 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 CLIC5Q9NZA1 410 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 FBXW11Q9UKB1 542 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 FAM159BA6NKW6 160 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 MGRN1O60291 552 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 GPR32O75388 356 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 GMNNO75496 209 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 ACADSP16219 412 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 SLC26A3P40879 764 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 MAPK8P45983 427 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 PPP3CCP48454 512 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 NDST2P52849 883 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF252P-AS1Q0IIN9 211 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 ITGA9Q13797 1035 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 USP10Q14694 798 aaKnown RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 PACS1Q6VY07 963 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 SERINC5Q86VE9 423 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 ARID3BQ8IVW6 561 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 BTBD10Q9BSF8 475 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 NPHS2Q9NP85 383 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 TTLL3Q9Y4R7 772 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 TEX264Q9Y6I9 313 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 TNS1Q9HBL0 1735 aaKnown RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 CRCPO75575 148 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 GJB1P08034 283 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 CST5P28325 142 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 PSMC4P43686 418 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 CLNS1AP54105 237 aaKnown RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 PURAQ00577 322 aaKnown RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 CHI3L2Q15782 390 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 MARC1Q5VT66 337 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 FAM91A1Q658Y4 838 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 FOXR1Q6PIV2 292 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 IFNL1Q8IU54 200 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 HHIPL1Q96JK4 782 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 EIF2AQ9BY44 585 aaKnown RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 MLXIPLQ9NP71 852 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 RASSF9O75901 435 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 S100BP04271 92 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 ALDH2P05091 517 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 IBSPP21815 317 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 PRDX6P30041 224 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 STX5Q13190 355 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 UNC5AQ6ZN44 842 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 PDCD6IPQ8WUM4 868 aaKnown RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 TSGA13Q96PP4 275 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 MYCBPQ99417 103 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 BEGAINQ9BUH8 593 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 SLC13A1Q9BZW2 595 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 TKTL2Q9H0I9 626 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 EPB41L4BQ9H329 900 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 ARHGEF38Q9NXL2 777 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 HEY2Q9UBP5 337 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 SMIM24O75264 130 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 TMEM63AO94886 807 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 CTSHP09668 335 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 PYGBP11216 843 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 YBX3P16989 372 aaKnown RBP eCLIP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 YWHAQP27348 245 aa4.66□□□□□ -1.66
SCN1A-210ENST00000635776 HOXA11P31270 313 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 HARS2P49590 506 aaKnown RBP4.66□□□□□ -1.66
SCN1A-210ENST00000635776 CXCR3P49682 368 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms