RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TP53INP2Q8IXH6 220 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 C4orf33Q8N1A6 199 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 PDCD7Q8N8D1 485 aaKnown RBP22.67■■□□□ 1.22
PNKP-220ENST00000627232 NETO2Q8NC67 525 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 CASP10Q92851 521 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 CABS1Q96KC9 395 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 SERPINB11Q96P15 392 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 KIF9Q9HAQ2 790 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 NMUR1Q9HB89 426 aa22.67■■□□□ 1.22
PNKP-220ENST00000627232 KLHL8Q9P2G9 620 aaPredicted RBP22.67■■□□□ 1.22
PNKP-220ENST00000627232 MYO18AQ92614 2054 aaKnown RBP22.67■■□□□ 1.22
PNKP-220ENST00000627232 FNDC1Q4ZHG4 1894 aaPredicted RBP22.66■■□□□ 1.22
PNKP-220ENST00000627232 SDR42E2A6NKP2 422 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 TCP11X1B4DZS4 312 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 FGF10O15520 208 aaPredicted RBP22.66■■□□□ 1.22
PNKP-220ENST00000627232 CA4P22748 312 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 SLC11A1P49279 550 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 ITIH4Q14624 930 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 PRPF39Q86UA1 669 aaKnown RBP22.66■■□□□ 1.22
PNKP-220ENST00000627232 LRRC6Q86X45 466 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 LZTR1Q8N653 840 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 STAMBPL1Q96FJ0 436 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 NAT9Q9BTE0 207 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 GPR62Q9BZJ7 368 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 MLXIPLQ9NP71 852 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 COMMD8Q9NX08 183 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 OGDHLQ9ULD0 1010 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 NEU3Q9UQ49 428 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 MAD1L1Q9Y6D9 718 aa22.66■■□□□ 1.22
PNKP-220ENST00000627232 FAM159BA6NKW6 160 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 ERI2A8K979 691 aaKnown RBP22.65■■□□□ 1.22
PNKP-220ENST00000627232 H7C4K7 107 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 PAGE1O75459 146 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 CXCL10P02778 98 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 KRT4P19013 534 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 GRIA1P42261 906 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 GATMP50440 423 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 LGSNQ5TDP6 509 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 TTC39BQ5VTQ0 682 aaPredicted RBP22.65■■□□□ 1.22
PNKP-220ENST00000627232 ITPRIPL1Q6GPH6 555 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 RGS9BPQ6ZS82 235 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 CEP57Q86XR8 500 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 TBC1D31Q96DN5 1066 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 TGS1Q96RS0 853 aaKnown RBP22.65■■□□□ 1.22
PNKP-220ENST00000627232 CATSPERBQ9H7T0 1116 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 SFMBT1Q9UHJ3 866 aa22.65■■□□□ 1.22
PNKP-220ENST00000627232 SCN5AQ14524 2016 aa22.64■■□□□ 1.22
PNKP-220ENST00000627232 GOLGA6L7A0A1B0GV03 622 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 FAM92AA1XBS5 289 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 KCNU1A8MYU2 1149 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 KCNK1O00180 336 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 TM9SF1O15321 606 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 SUN1O94901 812 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 RTN3O95197 1032 aaPredicted RBP22.64■■□□□ 1.21
PNKP-220ENST00000627232 MT-ND3P03897 115 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 SLC2A3P11169 496 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 PGFP49763 221 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 NUGGCQ68CJ6 796 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 FUT10Q6P4F1 479 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 CNPY4Q8N129 248 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 MPP5Q8N3R9 675 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 ANKS4BQ8N8V4 417 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 BANPQ8N9N5 519 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 SPPL2BQ8TCT7 592 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 TSGA13Q96PP4 275 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 GBA3Q9H227 469 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 SHROOM3Q8TF72 1996 aa22.64■■□□□ 1.21
PNKP-220ENST00000627232 TBC1D4O60343 1298 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 KRT37O76014 449 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 ALDH1A2O94788 518 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 RPA3P35244 121 aaPredicted RBP22.63■■□□□ 1.21
PNKP-220ENST00000627232 SLC18A2Q05940 514 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 FAAP100Q0VG06 881 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 IFT88Q13099 833 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 GPR17Q13304 367 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 DDR2Q16832 855 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 TCTN1Q2MV58 587 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 TEX44Q53QW1 395 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 PPM1NQ8N819 430 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 C2orf15Q8WU43 125 aaKnown RBP22.63■■□□□ 1.21
PNKP-220ENST00000627232 DPF3Q92784 378 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 C1orf74Q96LT6 269 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 DEFB118Q96PH6 123 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 CEP41Q9BYV8 373 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 SIK2Q9H0K1 926 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 MOCS1Q9NZB8 636 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 TLR6Q9Y2C9 796 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 GREB1Q4ZG55 1949 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 TET1Q8NFU7 2136 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 NUP205Q92621 2012 aa22.63■■□□□ 1.21
PNKP-220ENST00000627232 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.62■■□□□ 1.21
PNKP-220ENST00000627232 PIAS1O75925 651 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 AP2A1O95782 977 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 GALTP07902 379 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 PGAM1P18669 254 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 TAC1P20366 129 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 CCNCP24863 283 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 GPR15P49685 360 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 PSEN1P49768 467 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 RWDD4Q6NW29 188 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms