RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SGK2Q9HBY8 427 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 CNGB3Q9NQW8 809 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 STIM2Q9P246 746 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 XPO7Q9UIA9 1087 aaKnown RBP11.48□□□□□ -0.57
DDX41-218ENST00000625286 SLCO3A1Q9UIG8 710 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 COL5A1P20908 1838 aaPredicted RBP11.47□□□□□ -0.57
DDX41-218ENST00000625286 A0A1W2PP55 124 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 A0A1W2PPC4 97 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 FAM47DPA6NHR8 397 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 CETN3O15182 167 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 MID1O15344 667 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 ACSL4O60488 711 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 ATP5BP06576 529 aaKnown RBP11.47□□□□□ -0.57
DDX41-218ENST00000625286 POLR2EP19388 210 aaKnown RBP11.47□□□□□ -0.57
DDX41-218ENST00000625286 ITPKBP27987 946 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 CSKP41240 450 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 GRK6P43250 576 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 NUMBP49757 651 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 CCT8P50990 548 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 METAP1P53582 386 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 RACK1P63244 317 aaKnown RBP11.47□□□□□ -0.57
DDX41-218ENST00000625286 DNAJC3Q13217 504 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 PNOCQ13519 176 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 E2F5Q15329 346 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 TEAD4Q15561 434 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 HNRNPA1L2Q32P51 320 aaKnown RBP11.47□□□□□ -0.57
DDX41-218ENST00000625286 DHX40Q8IX18 779 aaKnown RBP11.47□□□□□ -0.57
DDX41-218ENST00000625286 APCDD1Q8J025 514 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 CFAP52Q8N1V2 620 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 GALNT15Q8N3T1 639 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 AADATQ8N5Z0 425 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 LMO3Q8TAP4 145 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 SAP25Q8TEE9 199 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 ERCC4Q92889 916 aaPredicted RBP11.47□□□□□ -0.57
DDX41-218ENST00000625286 SLC35C1Q96A29 364 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 NUCKS1Q9H1E3 243 aaKnown RBP11.47□□□□□ -0.57
DDX41-218ENST00000625286 FBXL12Q9NXK8 326 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 SUN2Q9UH99 717 aa11.47□□□□□ -0.57
DDX41-218ENST00000625286 ATMQ13315 3056 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 A0A1W2PQ27 194 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 A0A1W2PQ64 194 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 TRIM49BA6NDI0 452 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 PLK4O00444 970 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 TLX3O43711 291 aaPredicted RBP11.46□□□□□ -0.57
DDX41-218ENST00000625286 ZIC2O95409 532 aaPredicted RBP11.46□□□□□ -0.57
DDX41-218ENST00000625286 LTFP02788 710 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 SETSIPP0DME0 302 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 EPB41P11171 864 aaKnown RBP11.46□□□□□ -0.57
DDX41-218ENST00000625286 VAV1P15498 845 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 TBX4P57082 545 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 SLC8A3P57103 927 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 ZNF445P59923 1031 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 BNIP3Q12983 259 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 ARID5BQ14865 1188 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 CST6Q15828 149 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 DCAF6Q58WW2 860 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 DCAF17Q5H9S7 520 aaPredicted RBP11.46□□□□□ -0.57
DDX41-218ENST00000625286 TCERG1LQ5VWI1 586 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 SYPL2Q5VXT5 272 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 TMEM270Q6UE05 265 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 USP30Q70CQ3 517 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 MMAAQ8IVH4 418 aaKnown RBP11.46□□□□□ -0.57
DDX41-218ENST00000625286 MFN1Q8IWA4 741 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 SCUBE3Q8IX30 993 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 SIX6OS1Q8N1H7 587 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 PDCD7Q8N8D1 485 aaKnown RBP11.46□□□□□ -0.57
DDX41-218ENST00000625286 ADAM32Q8TC27 787 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 AZIN2Q96A70 460 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 SLC39A13Q96H72 371 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 ELF4Q99607 663 aaPredicted RBP11.46□□□□□ -0.57
DDX41-218ENST00000625286 DNAI2Q9GZS0 605 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 CAAP1Q9H8G2 361 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 FBRSQ9HAH7 460 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 GDPD2Q9HCC8 539 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 HESX1Q9UBX0 185 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 ERVW-1Q9UQF0 538 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 NAALADL1Q9UQQ1 740 aa11.46□□□□□ -0.57
DDX41-218ENST00000625286 NYNRINQ9P2P1 1898 aaKnown RBP11.45□□□□□ -0.58
DDX41-218ENST00000625286 STX10O60499 249 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 PRB1P04280 392 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 HSP90AA1P07900 732 aaKnown RBP11.45□□□□□ -0.58
DDX41-218ENST00000625286 BRD2P25440 801 aaKnown RBP11.45□□□□□ -0.58
DDX41-218ENST00000625286 SLC8A1P32418 973 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 RPL34P49207 117 aaKnown RBP11.45□□□□□ -0.58
DDX41-218ENST00000625286 PITX1P78337 314 aaPredicted RBP11.45□□□□□ -0.58
DDX41-218ENST00000625286 CNGA2Q16280 664 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 MS4A13Q5J8X5 152 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 PITRM1Q5JRX3 1037 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 KANSL1Q7Z3B3 1105 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 TMPRSS12Q86WS5 348 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 SPATS2Q86XZ4 545 aaKnown RBP11.45□□□□□ -0.58
DDX41-218ENST00000625286 HSCBQ8IWL3 235 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 STK40Q8N2I9 435 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 CARNMT1Q8N4J0 409 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 DQX1Q8TE96 717 aaKnown RBP11.45□□□□□ -0.58
DDX41-218ENST00000625286 GANCQ8TET4 914 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 IRGQQ8WZA9 623 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 TSC1Q92574 1164 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 GOLGA1Q92805 767 aa11.45□□□□□ -0.58
DDX41-218ENST00000625286 PTPRN2Q92932 1015 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms