RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ZBTB8BQ8NAP8 495 aaPredicted RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 PGBD4Q96DM1 585 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 FERMT1Q9BQL6 677 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 TCF7L2Q9NQB0 619 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 ARHGEF38Q9NXL2 777 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 BCAP29Q9UHQ4 241 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 VPS28Q9UK41 221 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 FAF1Q9UNN5 650 aaPredicted RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 TDRKHQ9Y2W6 561 aaKnown RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 SH3GLB1Q9Y371 365 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 RNF11Q9Y3C5 154 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 GOLGA8QA0A0J9YX86 632 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 GOLGA8OA6NCC3 632 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 GOLGA8NF8WBI6 632 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 TBC1D12O60347 775 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 MICAL2O94851 1124 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 NR3C2P08235 984 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 PDGFRAP16234 1089 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 CDH8P55286 799 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 PPP2R5DQ14738 602 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 PDK2Q15119 407 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 SMAD1Q15797 465 aaKnown RBP14.46□□□□□ -0.09
LDB3-209ENST00000623056 POTEHQ6S545 545 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 C4orf22Q6V702 233 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 NAPRTQ6XQN6 538 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 CDKL3Q8IVW4 592 aaPredicted RBP14.46□□□□□ -0.09
LDB3-209ENST00000623056 TNS4Q8IZW8 715 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 TRIML2Q8N7C3 387 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 AGR3Q8TD06 166 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 FAM151AQ8WW52 585 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 CDKL2Q92772 493 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 USP13Q92995 863 aaPredicted RBP14.46□□□□□ -0.09
LDB3-209ENST00000623056 ZNF512Q96ME7 567 aaPredicted RBP14.46□□□□□ -0.09
LDB3-209ENST00000623056 KLHL32Q96NJ5 620 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 PCDH18Q9HCL0 1135 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 FAIMQ9NVQ4 179 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 TBCCD1Q9NVR7 557 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 PPP1R1BQ9UD71 204 aaPredicted RBP14.46□□□□□ -0.09
LDB3-209ENST00000623056 KIAA1217Q5T5P2 1943 aa14.46□□□□□ -0.09
LDB3-209ENST00000623056 C2CD4BA6NLJ0 364 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 CFLARO15519 480 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 GCATO75600 419 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 RGS20O76081 388 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 EPHA3P29320 983 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 ALDH3B2P48448 385 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 STILQ15468 1287 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 SCYL2Q6P3W7 929 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 LPCAT2Q7L5N7 544 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 DLG3Q92796 817 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 RCN3Q96D15 328 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 BIRC8Q96P09 236 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 TWNKQ96RR1 684 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 TCHPQ9BT92 498 aa14.46□□□□□ -0.1
LDB3-209ENST00000623056 M0QYV0 167 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 PIK3R2O00459 728 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 NOP56O00567 594 aaKnown RBP14.45□□□□□ -0.1
LDB3-209ENST00000623056 GRAP2O75791 330 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 DGKIO75912 1065 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 BCAS2O75934 225 aaPredicted RBP14.45□□□□□ -0.1
LDB3-209ENST00000623056 ZNF26P17031 533 aaPredicted RBP14.45□□□□□ -0.1
LDB3-209ENST00000623056 PTPN1P18031 435 aaKnown RBP14.45□□□□□ -0.1
LDB3-209ENST00000623056 TYK2P29597 1187 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 DGKZQ13574 1117 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 BAATQ14032 418 aaPredicted RBP14.45□□□□□ -0.1
LDB3-209ENST00000623056 CA9Q16790 459 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 TDRD5Q8NAT2 981 aaKnown RBP14.45□□□□□ -0.1
LDB3-209ENST00000623056 SMYD1Q8NB12 490 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 PDCD6IPQ8WUM4 868 aaKnown RBP14.45□□□□□ -0.1
LDB3-209ENST00000623056 PIWIL1Q96J94 861 aaKnown RBP14.45□□□□□ -0.1
LDB3-209ENST00000623056 CNDP1Q96KN2 507 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 SLC4A5Q9BY07 1137 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 TMEM134Q9H6X4 195 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 WDR55Q9H6Y2 383 aaPredicted RBP14.45□□□□□ -0.1
LDB3-209ENST00000623056 ZNF277Q9NRM2 450 aaPredicted RBP14.45□□□□□ -0.1
LDB3-209ENST00000623056 HMGXB4Q9UGU5 601 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 CNTNAP1P78357 1384 aa14.45□□□□□ -0.1
LDB3-209ENST00000623056 F5H423 210 aaPredicted RBP14.44□□□□□ -0.1
LDB3-209ENST00000623056 XPO1O14980 1071 aaKnown RBP14.44□□□□□ -0.1
LDB3-209ENST00000623056 MAFGO15525 162 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 SUPT3HO75486 399 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 RNASEH2AO75792 299 aaKnown RBP14.44□□□□□ -0.1
LDB3-209ENST00000623056 RAD17O75943 681 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 ZBTB7AO95365 584 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 ME2P23368 584 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 VARSP26640 1264 aaKnown RBP14.44□□□□□ -0.1
LDB3-209ENST00000623056 DPP6P42658 865 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 STT3AP46977 705 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 SEMA5AQ13591 1074 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 CAPSQ13938 189 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 NRF1Q16656 503 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 XRRA1Q6P2D8 792 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 DHRS4L2Q6PKH6 230 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 Q6ZNX1 250 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 CMC1Q7Z7K0 106 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 CROCCP3Q8IVE0 287 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 RP9Q8TA86 221 aaKnown RBP14.44□□□□□ -0.1
LDB3-209ENST00000623056 PIH1D1Q9NWS0 290 aaKnown RBP14.44□□□□□ -0.1
LDB3-209ENST00000623056 MTMR10Q9NXD2 777 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 EPS15L1Q9UBC2 864 aa14.44□□□□□ -0.1
LDB3-209ENST00000623056 CNOT11Q9UKZ1 510 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms