RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 SLC26A9Q7LBE3 791 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 LRRC52Q8N7C0 313 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 GPATCH11Q8N954 259 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 CCDC110Q8TBZ0 833 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 PTCD3Q96EY7 689 aaKnown RBP17.96■□□□□ 0.47
FAM3A-222ENST00000621967 SIGLEC10Q96LC7 697 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 TUBB6Q9BUF5 446 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 HEY2Q9UBP5 337 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 HESX1Q9UBX0 185 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 RFPL1O75677 317 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 RPSAP08865 295 aaKnown RBP17.96■□□□□ 0.47
FAM3A-222ENST00000621967 GM2AP17900 193 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 GNAZP19086 355 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 TFE3P19532 575 aaPredicted RBP17.96■□□□□ 0.47
FAM3A-222ENST00000621967 LRPAP1P30533 357 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 SLC8A3P57103 927 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 LGSNQ5TDP6 509 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 RASIP1Q5U651 963 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 FAM91A1Q658Y4 838 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 UNC5AQ6ZN44 842 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 ZNF280BQ86YH2 543 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 CTAGE3PQ8IX95 158 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 ENDOVQ8N8Q3 282 aaKnown RBP17.96■□□□□ 0.47
FAM3A-222ENST00000621967 ZNF689Q96CS4 500 aaPredicted RBP17.96■□□□□ 0.47
FAM3A-222ENST00000621967 ZNF560Q96MR9 790 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 UROC1Q96N76 676 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 ANKRD27Q96NW4 1050 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 TMEM120AQ9BXJ8 343 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 B3GNT5Q9BYG0 378 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 RC3H2Q9HBD1 1191 aaKnown RBP17.96■□□□□ 0.47
FAM3A-222ENST00000621967 CACNG4Q9UBN1 327 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 PLLPQ9Y342 182 aa17.96■□□□□ 0.47
FAM3A-222ENST00000621967 TSC2P49815 1807 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 RANBP2P49792 3224 aaKnown RBP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 FAM159BA6NKW6 160 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 E7ENQ6 273 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 DDHD2O94830 711 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 MAP3K6O95382 1288 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 METTL18O95568 372 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 ZFXP17010 805 aaPredicted RBP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 CALB2P22676 271 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 RPL9P32969 192 aaKnown RBP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 NR2C2P49116 596 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 CLCNKBP51801 687 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 MRPS5P82675 430 aaKnown RBP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 DSC1Q08554 894 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 SLC10A2Q12908 348 aaPredicted RBP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 PPP6R3Q5H9R7 873 aaPredicted RBP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 SPOUT1Q5T280 376 aaKnown RBP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 CMTR2Q8IYT2 770 aaKnown RBP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 VPS52Q8N1B4 723 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 PLCD3Q8N3E9 789 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 MTBPQ96DY7 904 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 ZNF570Q96NI8 536 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 QKIQ96PU8 341 aaKnown RBP eCLIP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 MIPEPQ99797 713 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 EBNA1BP2Q99848 306 aaKnown RBP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 MTMR10Q9NXD2 777 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 NKX1-2Q9UD57 310 aaPredicted RBP17.95■□□□□ 0.46
FAM3A-222ENST00000621967 INSL6Q9Y581 213 aa17.95■□□□□ 0.46
FAM3A-222ENST00000621967 LAMA2P24043 3122 aaKnown RBP17.94■□□□□ 0.46
FAM3A-222ENST00000621967 TLL1O43897 1013 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 CCDC22O60826 627 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 CSH1P0DML2 217 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 CSH2P0DML3 217 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 OR1G1P47890 313 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 MLLT1Q03111 559 aaPredicted RBP17.94■□□□□ 0.46
FAM3A-222ENST00000621967 GBE1Q04446 702 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 KRT72Q14CN4 511 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 TRIM42Q8IWZ5 723 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 COLGALT2Q8IYK4 626 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.94■□□□□ 0.46
FAM3A-222ENST00000621967 GSDMBQ8TAX9 411 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 C7orf26Q96N11 449 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 IQCGQ9H095 443 aaKnown RBP17.94■□□□□ 0.46
FAM3A-222ENST00000621967 ARL8BQ9NVJ2 186 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 HCSTQ9UBK5 93 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 DNAJB4Q9UDY4 337 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 COL4A6Q14031 1691 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 B4GALT3O60512 393 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 SERPINB3P29508 390 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 PNPLA4P41247 253 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 HTRA4P83105 476 aaPredicted RBP17.94■□□□□ 0.46
FAM3A-222ENST00000621967 BST2Q10589 180 aaKnown RBP17.94■□□□□ 0.46
FAM3A-222ENST00000621967 SEMA5AQ13591 1074 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 UPP1Q16831 310 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 SOWAHAQ2M3V2 549 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 ANKRD20A2Q5SQ80 823 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 ANKRD20A1Q5TYW2 823 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 ANKRD20A3Q5VUR7 823 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 RAD9AQ99638 391 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 PAAF1Q9BRP4 392 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 XAB2Q9HCS7 855 aaKnown RBP17.94■□□□□ 0.46
FAM3A-222ENST00000621967 SIRPGQ9P1W8 387 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 AP4E1Q9UPM8 1137 aa17.94■□□□□ 0.46
FAM3A-222ENST00000621967 PIRO00625 290 aa17.93■□□□□ 0.46
FAM3A-222ENST00000621967 UGT1A9O60656 530 aa17.93■□□□□ 0.46
FAM3A-222ENST00000621967 KRT38O76015 456 aa17.93■□□□□ 0.46
FAM3A-222ENST00000621967 TPBGLP0DKB5 382 aa17.93■□□□□ 0.46
FAM3A-222ENST00000621967 TAF6P49848 677 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms