RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 ZCCHC9Q8N567 271 aaKnown RBP28.66■■■□□ 2.18
BRF1-221ENST00000619151 PSMG2Q969U7 264 aa28.66■■■□□ 2.18
BRF1-221ENST00000619151 TCF25Q9BQ70 676 aa28.66■■■□□ 2.18
BRF1-221ENST00000619151 CCSER2Q9H7U1 834 aa28.66■■■□□ 2.18
BRF1-221ENST00000619151 HS3ST4Q9Y661 456 aa28.66■■■□□ 2.18
BRF1-221ENST00000619151 IGLV3-27P01718 113 aa28.65■■■□□ 2.18
BRF1-221ENST00000619151 SRGAP2BP0DMP2 458 aa28.65■■■□□ 2.18
BRF1-221ENST00000619151 MLLT6P55198 1093 aaPredicted RBP28.65■■■□□ 2.18
BRF1-221ENST00000619151 LRIG3Q6UXM1 1119 aa28.65■■■□□ 2.18
BRF1-221ENST00000619151 CCDC25Q86WR0 208 aa28.65■■■□□ 2.18
BRF1-221ENST00000619151 LZTR1Q8N653 840 aa28.65■■■□□ 2.18
BRF1-221ENST00000619151 HTR3CQ8WXA8 447 aa28.65■■■□□ 2.18
BRF1-221ENST00000619151 DONSONQ9NYP3 566 aa28.65■■■□□ 2.18
BRF1-221ENST00000619151 LPXNO60711 386 aa28.64■■■□□ 2.18
BRF1-221ENST00000619151 PRKD1Q15139 912 aaPredicted RBP28.64■■■□□ 2.18
BRF1-221ENST00000619151 LRRC31Q6UY01 552 aa28.64■■■□□ 2.18
BRF1-221ENST00000619151 TRMT10CQ7L0Y3 403 aaKnown RBP28.64■■■□□ 2.18
BRF1-221ENST00000619151 IQCKQ8N0W5 287 aa28.64■■■□□ 2.18
BRF1-221ENST00000619151 GOLGA6L1Q8N7Z2 621 aa28.64■■■□□ 2.18
BRF1-221ENST00000619151 MRPL43Q8N983 215 aaKnown RBP28.64■■■□□ 2.18
BRF1-221ENST00000619151 KLHL5Q96PQ7 755 aa28.64■■■□□ 2.18
BRF1-221ENST00000619151 FARP1Q9Y4F1 1045 aaPredicted RBP28.64■■■□□ 2.18
BRF1-221ENST00000619151 CLUHO75153 1309 aa28.64■■■□□ 2.18
BRF1-221ENST00000619151 C5orf60A6NFR6 353 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 E9PAM4 449 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 SOX1O00570 391 aaPredicted RBP28.64■■■□□ 2.17
BRF1-221ENST00000619151 TGM5O43548 720 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 OPA1O60313 960 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 GCATO75600 419 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 GGCXP38435 758 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 FAM193AP78312 1265 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 B4GALNT4Q76KP1 1039 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 DNAJB7Q7Z6W7 309 aaPredicted RBP28.64■■■□□ 2.17
BRF1-221ENST00000619151 PKNOX2Q96KN3 472 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 ZIM3Q96PE6 472 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 KLC2Q9H0B6 622 aa28.64■■■□□ 2.17
BRF1-221ENST00000619151 PABPC3Q9H361 631 aaKnown RBP28.64■■■□□ 2.17
BRF1-221ENST00000619151 MTSS1O43312 755 aa28.63■■■□□ 2.17
BRF1-221ENST00000619151 BASP1P80723 227 aaKnown RBP28.63■■■□□ 2.17
BRF1-221ENST00000619151 COG7P83436 770 aa28.63■■■□□ 2.17
BRF1-221ENST00000619151 AP1B1Q10567 949 aa28.63■■■□□ 2.17
BRF1-221ENST00000619151 UAP1Q16222 522 aaPredicted RBP28.63■■■□□ 2.17
BRF1-221ENST00000619151 CCNYQ8ND76 341 aa28.63■■■□□ 2.17
BRF1-221ENST00000619151 GDPD5Q8WTR4 605 aa28.63■■■□□ 2.17
BRF1-221ENST00000619151 PRCCQ92733 491 aaPredicted RBP28.63■■■□□ 2.17
BRF1-221ENST00000619151 PHACTR1Q9C0D0 580 aa28.63■■■□□ 2.17
BRF1-221ENST00000619151 PRDM12Q9H4Q4 367 aa28.63■■■□□ 2.17
BRF1-221ENST00000619151 NEU3Q9UQ49 428 aa28.63■■■□□ 2.17
BRF1-221ENST00000619151 PLAAQ9Y263 795 aa28.63■■■□□ 2.17
BRF1-221ENST00000619151 LRG1P02750 347 aa28.62■■■□□ 2.17
BRF1-221ENST00000619151 CHKAP35790 457 aa28.62■■■□□ 2.17
BRF1-221ENST00000619151 PABPC1LQ4VXU2 614 aaKnown RBP28.62■■■□□ 2.17
BRF1-221ENST00000619151 PIK3R6Q5UE93 754 aa28.62■■■□□ 2.17
BRF1-221ENST00000619151 DENND2CQ68D51 928 aa28.62■■■□□ 2.17
BRF1-221ENST00000619151 CPT1BQ92523 772 aa28.62■■■□□ 2.17
BRF1-221ENST00000619151 TTYH1Q9H313 450 aaPredicted RBP28.62■■■□□ 2.17
BRF1-221ENST00000619151 PPARGC1AQ9UBK2 798 aaKnown RBP28.62■■■□□ 2.17
BRF1-221ENST00000619151 MYO7AQ13402 2215 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 C2orf71A6NGG8 1288 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 IRS1P35568 1242 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 GALNT2Q10471 571 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 MS4A13Q5J8X5 152 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 PPP1R21Q6ZMI0 780 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 RELL1Q8IUW5 271 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 ELMOD1Q8N336 334 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 PLD4Q96BZ4 506 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 HDAC11Q96DB2 347 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 LGMNQ99538 433 aa28.61■■■□□ 2.17
BRF1-221ENST00000619151 XPO7Q9UIA9 1087 aaKnown RBP28.61■■■□□ 2.17
BRF1-221ENST00000619151 A0A0A0MRY4 1105 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 WASH4PA8MWX3 477 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 CHADO15335 359 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 GLUD1P00367 558 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 HMBSP08397 361 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 VAV1P15498 845 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 EIF3BP55884 814 aaKnown RBP28.6■■■□□ 2.17
BRF1-221ENST00000619151 ZNF33AQ06730 810 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 PPIDQ08752 370 aaKnown RBP28.6■■■□□ 2.17
BRF1-221ENST00000619151 PLPP4Q5VZY2 271 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 LILRA6Q6PI73 481 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 ARHGEF18Q6ZSZ5 1173 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 NPWQ8N729 165 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 NAT8LQ8N9F0 302 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 SPATA13Q96N96 652 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 RAB6BQ9NRW1 208 aa28.6■■■□□ 2.17
BRF1-221ENST00000619151 COCHO43405 550 aa28.59■■■□□ 2.17
BRF1-221ENST00000619151 OPHN1O60890 802 aa28.59■■■□□ 2.17
BRF1-221ENST00000619151 HARS2P49590 506 aaKnown RBP28.59■■■□□ 2.17
BRF1-221ENST00000619151 CENPUQ71F23 418 aa28.59■■■□□ 2.17
BRF1-221ENST00000619151 CCDC33Q8N5R6 958 aa28.59■■■□□ 2.17
BRF1-221ENST00000619151 RTL3Q8N8U3 475 aaKnown RBP28.59■■■□□ 2.17
BRF1-221ENST00000619151 KREMEN2Q8NCW0 462 aa28.59■■■□□ 2.17
BRF1-221ENST00000619151 CCDC110Q8TBZ0 833 aa28.59■■■□□ 2.17
BRF1-221ENST00000619151 MICAL1Q8TDZ2 1067 aa28.59■■■□□ 2.17
BRF1-221ENST00000619151 P2RY11Q96G91 374 aa28.59■■■□□ 2.17
BRF1-221ENST00000619151 RBM15Q96T37 977 aaKnown RBP eCLIP28.59■■■□□ 2.176e-6■■■■□ 19.9
BRF1-221ENST00000619151 FRMD8Q9BZ67 464 aaPredicted RBP28.59■■■□□ 2.17
BRF1-221ENST00000619151 SPDYE4A6NLX3 237 aa28.59■■■□□ 2.17
BRF1-221ENST00000619151 AGPSO00116 658 aa28.59■■■□□ 2.17
BRF1-221ENST00000619151 RFXAPO00287 272 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms