RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PTPN3P26045 913 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 PBX3P40426 434 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 SLC5A3P53794 718 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 ZBTB17Q13105 803 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 BIRC2Q13490 618 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 MRPL10Q7Z7H8 261 aaKnown RBP12.74□□□□□ -0.37
CIITA-212ENST00000618207 ANKLE1Q8NAG6 615 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 MCUQ8NE86 351 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 RFWD2Q8NHY2 731 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 APOPT1Q96IL0 206 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 ACBD6Q9BR61 282 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 MYLK2Q9H1R3 596 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 XAB2Q9HCS7 855 aaKnown RBP12.74□□□□□ -0.37
CIITA-212ENST00000618207 PRKAG3Q9UGI9 489 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 TET1Q8NFU7 2136 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 ZNF487B1APH4 448 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 ZNF623O75123 536 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 KITP10721 976 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 CKBP12277 381 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 TPSB2P20231 275 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 GRK4P32298 578 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 TSPY1Q01534 308 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 GRIK3Q13003 919 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 PRKD1Q15139 912 aaPredicted RBP12.74□□□□□ -0.37
CIITA-212ENST00000618207 TPSAB1Q15661 275 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 PLEKHG4Q58EX7 1191 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 C16orf46Q6P387 395 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 RNF180Q86T96 592 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 KLHDC9Q8NEP7 349 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 GLT1D1Q96MS3 346 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 TMEM237Q96Q45 408 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 KLC4Q9NSK0 619 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 MARCOQ9UEW3 520 aaPredicted RBP12.74□□□□□ -0.37
CIITA-212ENST00000618207 FETUBQ9UGM5 382 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 SLC12A4Q9UP95 1085 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 PCDHA11Q9Y5I1 949 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 RPS6KL1Q9Y6S9 549 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 HMX2A2RU54 273 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 KLHL33A6NCF5 533 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 SDR42E2A6NKP2 422 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 HACD1B0YJ81 288 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 KIF3CO14782 793 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 OPHN1O60890 802 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 PRKCHP24723 683 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 TARSP26639 723 aaKnown RBP12.73□□□□□ -0.37
CIITA-212ENST00000618207 FDFT1P37268 417 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 DSC3Q14574 896 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 MBTPS1Q14703 1052 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 RASA2Q15283 850 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 BTBD8Q5XKL5 378 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 CCSAPQ6IQ19 270 aaPredicted RBP12.73□□□□□ -0.37
CIITA-212ENST00000618207 ZCCHC23Q6ZST2 131 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 BNIPLQ7Z465 357 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 THEM5Q8N1Q8 247 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 KLHL29Q96CT2 875 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 OXNAD1Q96HP4 312 aaPredicted RBP12.73□□□□□ -0.37
CIITA-212ENST00000618207 RCOR3Q9P2K3 495 aaPredicted RBP12.73□□□□□ -0.37
CIITA-212ENST00000618207 CHKBQ9Y259 395 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 NT5C1B-RDH14C9J2C7 533 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 NFKB1P19838 968 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 MAGEA3P43357 314 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 RAB27AP51159 221 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 NCALDP61601 193 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 PAFAH1B3Q15102 231 aaKnown RBP12.73□□□□□ -0.37
CIITA-212ENST00000618207 CERCAMQ5T4B2 595 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 SWT1Q5T5J6 900 aaKnown RBP12.73□□□□□ -0.37
CIITA-212ENST00000618207 CYB5D1Q6P9G0 228 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 GLB1LQ6UWU2 654 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 TTC9BQ8N6N2 239 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 PCSK9Q8NBP7 692 aaKnown RBP12.73□□□□□ -0.37
CIITA-212ENST00000618207 RAET1EQ8TD07 263 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 ARNTL2Q8WYA1 636 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 AZIN2Q96A70 460 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 EPAS1Q99814 870 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 FRMD8Q9BZ67 464 aaPredicted RBP12.73□□□□□ -0.37
CIITA-212ENST00000618207 NDFIP2Q9NV92 336 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 MPP6Q9NZW5 540 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 BAIAP2L1Q9UHR4 511 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 STARD13Q9Y3M8 1113 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 TSC2P49815 1807 aa12.73□□□□□ -0.37
CIITA-212ENST00000618207 TM9SF1O15321 606 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 RFPL1O75677 317 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 KRT38O76015 456 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 MAGEA6P43360 314 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 SERPINB4P48594 390 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 GLUD2P49448 558 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 GATMP50440 423 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 MNAT1P51948 309 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 PGGT1BP53609 377 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 FAM171BQ6P995 826 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 OTOP3Q7RTS5 596 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 ZNF276Q8N554 614 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 CASP10Q92851 521 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 ZNF669Q96BR6 464 aaPredicted RBP12.72□□□□□ -0.37
CIITA-212ENST00000618207 ALKBH8Q96BT7 664 aaKnown RBP12.72□□□□□ -0.37
CIITA-212ENST00000618207 LRRC37BQ96QE4 947 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 TSSK1BQ9BXA7 367 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 NMUR1Q9HB89 426 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 RXFP1Q9HBX9 757 aa12.72□□□□□ -0.37
CIITA-212ENST00000618207 CBX6O95503 412 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms