RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 ATXN3LQ9H3M9 355 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 TGFB2P61812 414 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 TAB1Q15750 504 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 PABPC1LQ4VXU2 614 aaKnown RBP11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 ZNF410Q86VK4 478 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 SCAIQ8N9R8 606 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 OR56A4Q8NGH8 313 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 UBE2E3Q969T4 207 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 PIF1Q9H611 641 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 ARIH1Q9Y4X5 557 aaPredicted RBP11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 PNMA8CA0A1B0GUJ8 204 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 EPN2O95208 641 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 MAP3K6O95382 1288 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 FGRP09769 529 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 SLC1A6P48664 564 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 IL5RAQ01344 420 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 ARMC4Q5T2S8 1044 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 GJB7Q6PEY0 223 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 KCNMB4Q86W47 210 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 KYQ8NBH2 561 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 KCNB2Q92953 911 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 OSMRQ99650 979 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 TAGLN3Q9UI15 199 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 FAM50BQ9Y247 325 aa11.4□□□□□ -0.58
CCDC144B-208ENST00000618081 RRM1P23921 792 aa11.4□□□□□ -0.59
CCDC144B-208ENST00000618081 ZNF135P52742 658 aaPredicted RBP11.4□□□□□ -0.59
CCDC144B-208ENST00000618081 PTPN11Q06124 597 aaPredicted RBP11.4□□□□□ -0.59
CCDC144B-208ENST00000618081 KIAA0408Q6ZU52 694 aa11.4□□□□□ -0.59
CCDC144B-208ENST00000618081 SLC26A11Q86WA9 606 aa11.4□□□□□ -0.59
CCDC144B-208ENST00000618081 BSNDQ8WZ55 320 aa11.4□□□□□ -0.59
CCDC144B-208ENST00000618081 FIG4Q92562 907 aa11.4□□□□□ -0.59
CCDC144B-208ENST00000618081 SPATC1LQ9H0A9 340 aa11.4□□□□□ -0.59
CCDC144B-208ENST00000618081 PIGUQ9H490 435 aa11.4□□□□□ -0.59
CCDC144B-208ENST00000618081 SLC24A2Q9UI40 661 aa11.4□□□□□ -0.59
CCDC144B-208ENST00000618081 UBE2Q2LH0YL09 131 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 PIK3CDO00329 1044 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 SLC37A4O43826 429 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 TYMPP19971 482 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 C9orf131Q5VYM1 1079 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 FAM131BQ86XD5 332 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 RACGAP1Q9H0H5 632 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 A0A087X1B8 175 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 FAM205CA6NFA0 338 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 MYL12BO14950 172 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 FAM20BO75063 409 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 KLHL18O94889 574 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 CPA3P15088 417 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 AKAP5P24588 427 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 C1QBPQ07021 282 aaKnown RBP11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 TFAP2DQ7Z6R9 452 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 A1CFQ9NQ94 594 aaKnown RBP11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 SNCAIPQ9Y6H5 919 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 TRIM43BA6NCK2 446 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 TUBP50607 506 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 TRIM32Q13049 653 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 SEZ6Q53EL9 994 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 BNIPLQ7Z465 357 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 RGL4Q8IZJ4 473 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 SETD9Q8NE22 299 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 PAFAH2Q99487 392 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 TMEM79Q9BSE2 394 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 CATSPERZQ9NTU4 200 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 OR6B1O95007 311 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 AQP5P55064 265 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 PPP4CP60510 307 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 MGAT5Q09328 741 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 FGD3Q5JSP0 725 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 KRT74Q7RTS7 529 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 FAM220AQ7Z4H9 259 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 RXFP2Q8WXD0 754 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 TRAV19A0A0A6YYK7 116 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 SLC25A12O75746 678 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 POMCP01189 267 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 MAPTP10636 758 aaKnown RBP11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 NTSP30990 170 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 ULK2Q8IYT8 1036 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 UXS1Q8NBZ7 420 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 LPCAT1Q8NF37 534 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 RERGQ96A58 199 aaPredicted RBP11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 DCLRE1BQ9H816 532 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 GPRC5CQ9NQ84 441 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 SOHLH2Q9NX45 425 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 ANAPC2Q9UJX6 822 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 BCLAF3A2AJT9 711 aaKnown RBP11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 PDE9AO76083 593 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 SERPINA4P29622 427 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 PHF21BQ96EK2 531 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 TCF7L2Q9NQB0 619 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 EFCAB10A6NFE3 127 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 KPNA5O15131 536 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 TSC22D2O75157 780 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 ZBTB49Q6ZSB9 765 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 SYT15Q9BQS2 421 aa11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 SCAF8Q9UPN6 1271 aaKnown RBP11.39□□□□□ -0.59
CCDC144B-208ENST00000618081 F8VZ95 297 aa11.38□□□□□ -0.59
CCDC144B-208ENST00000618081 KLHL41O60662 606 aa11.38□□□□□ -0.59
CCDC144B-208ENST00000618081 SEC22BO75396 215 aa11.38□□□□□ -0.59
CCDC144B-208ENST00000618081 MARSP56192 900 aaKnown RBP11.38□□□□□ -0.59
CCDC144B-208ENST00000618081 CYP2A13Q16696 494 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms