RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MDM4O15151 490 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 AP1G2O75843 785 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 WISP1O95388 367 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 ITGAVP06756 1048 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 SKILP12757 684 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 TNNI1P19237 187 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 TRIM21P19474 475 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 LY6DQ14210 128 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 PSMD6Q15008 389 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 CEP135Q66GS9 1140 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 SERPINA13PQ6UXR4 307 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 SLC9A9Q8IVB4 645 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 EID2Q8N6I1 236 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 RBBP8NLQ8NC74 664 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 ZMIZ2Q8NF64 920 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 SMARCD1Q96GM5 515 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 NAF1Q96HR8 494 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 PIWIL1Q96J94 861 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 LGMNQ99538 433 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 ORAI3Q9BRQ5 295 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 CIPCQ9C0C6 399 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 CPNE5Q9HCH3 593 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 KRT82Q9NSB4 513 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 NXF1Q9UBU9 619 aaKnown RBP18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 NUDT5Q9UKK9 219 aa18.36■□□□□ 0.53
TRAPPC3-209ENST00000616395 VILLO15195 856 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 BEST1O76090 585 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 C6P13671 934 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 C21orf59P57076 290 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 CETN1Q12798 172 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 SHBQ15464 509 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 ANKS1BQ7Z6G8 1248 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 FAM186BQ8IYM0 893 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 FUKQ8N0W3 1084 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 TSC1Q92574 1164 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 ZNF516Q92618 1163 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 ELMO3Q96BJ8 720 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 PANX2Q96RD6 677 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 ERGIC2Q96RQ1 377 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 ELF4Q99607 663 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 HNRNPABQ99729 332 aaKnown RBP18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 SMOQ99835 787 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 ACE2Q9BYF1 805 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 BTBD1Q9H0C5 482 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 FBXO44Q9H4M3 255 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 DMAC2Q9NW81 257 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 KNTC1P50748 2209 aa18.35■□□□□ 0.53
TRAPPC3-209ENST00000616395 TEX33O43247 280 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 STX10O60499 249 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 STC2O76061 302 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 KLKB1P03952 638 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 ABCB4P21439 1286 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 PLA2G4AP47712 749 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 BCAT1P54687 386 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 DLG4P78352 724 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 TBX2Q13207 712 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 CAMK2GQ13555 558 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 EIF4HQ15056 248 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 PKDCCQ504Y2 493 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 FIGNQ5HY92 759 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 ARHGAP40Q5TG30 622 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 TMEM215Q68D42 235 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 SAP25Q8TEE9 199 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 TMEM174Q8WUU8 243 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 EEF2KMTQ96G04 330 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 NUCKS1Q9H1E3 243 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 NMUR1Q9HB89 426 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 CLEC4EQ9ULY5 219 aa18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 LUC7L2Q9Y383 392 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-209ENST00000616395 CKAP5Q14008 2032 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 LRRIQ3A6PVS8 624 aaPredicted RBP18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 MAPK13O15264 365 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 CYP26A1O43174 497 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 SLC28A2O43868 658 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 ZNF500O60304 480 aaPredicted RBP18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 AFPP02771 609 aaKnown RBP18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 IGHV4-34P06331 123 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 GLDCP23378 1020 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 PBX1P40424 430 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 TMPRSS3P57727 454 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 MYL6P60660 151 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 E2F5Q15329 346 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 TRIM59Q8IWR1 403 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 NEK11Q8NG66 645 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 SLC6A18Q96N87 628 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 EDEM3Q9BZQ6 932 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 SMYD3Q9H7B4 428 aa18.33■□□□□ 0.53
TRAPPC3-209ENST00000616395 NUMA1Q14980 2115 aa18.33■□□□□ 0.52
TRAPPC3-209ENST00000616395 RARGP13631 454 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 MAP3K7CLP57077 242 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 RACK1P63244 317 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 ARID5AQ03989 594 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 SRSF1Q07955 248 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 SYCP1Q15431 976 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 BROXQ5VW32 411 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 TCERG1LQ5VWI1 586 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 KLHDC10Q6PID8 442 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 INTS8Q75QN2 995 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 GPRIN1Q7Z2K8 1008 aa18.32■□□□□ 0.52
TRAPPC3-209ENST00000616395 ZNF366Q8N895 744 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms