RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 PPP4R4Q6NUP7 873 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 DCLRE1AQ6PJP8 1040 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 TMEM270Q6UE05 265 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 IQCKQ8N0W5 287 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 AADATQ8N5Z0 425 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 ENDOVQ8N8Q3 282 aaKnown RBP9.06□□□□□ -0.96
VPS11-206ENST00000614944 GIPC3Q8TF64 312 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 SLC20A1Q8WUM9 679 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 BCL7CQ8WUZ0 217 aaPredicted RBP9.06□□□□□ -0.96
VPS11-206ENST00000614944 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.06□□□□□ -0.96
VPS11-206ENST00000614944 NT5C1AQ9BXI3 368 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 RBMX2Q9Y388 322 aaKnown RBP9.06□□□□□ -0.96
VPS11-206ENST00000614944 TCRBV5S1A1TA0A578 114 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 FUOMA2VDF0 154 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 PEX11AO75192 247 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 BAIAP3O94812 1187 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 CALB1P05937 261 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 WEE2P0C1S8 567 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 KRT5P13647 590 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 PTPRDP23468 1912 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 AKAP5P24588 427 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 SNX16P57768 344 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 LILRA4P59901 499 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 WDR72Q3MJ13 1102 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 CYP4V2Q6ZWL3 525 aaPredicted RBP9.06□□□□□ -0.96
VPS11-206ENST00000614944 PDZD8Q8NEN9 1154 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 URGCPQ8TCY9 931 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 HCAR2Q8TDS4 363 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 FANCEQ9HB96 536 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 NEK6Q9HC98 313 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 SAMD15Q9P1V8 674 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 SLC12A6Q9UHW9 1150 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 STRIP2Q9ULQ0 834 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 STXBP5LQ9Y2K9 1186 aa9.06□□□□□ -0.96
VPS11-206ENST00000614944 ALPK3Q96L96 1907 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 SMIM23A6NLE4 172 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 EFEMP2O95967 443 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 CLTBP09497 229 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 MMP8P22894 467 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 TCEA1P23193 301 aaKnown RBP9.05□□□□□ -0.96
VPS11-206ENST00000614944 CBX5P45973 191 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 LHX1P48742 406 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 COG7P83436 770 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 PFKPQ01813 784 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 OCRLQ01968 901 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 SOX4Q06945 474 aaPredicted RBP9.05□□□□□ -0.96
VPS11-206ENST00000614944 NDUFAF5Q5TEU4 345 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 PLEKHA7Q6IQ23 1121 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 ZDHHC17Q8IUH5 632 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 GPR65Q8IYL9 337 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 MCOLN2Q8IZK6 566 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 SCML4Q8N228 414 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 CARNMT1Q8N4J0 409 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 TMEM35BQ8NCS4 154 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.05□□□□□ -0.96
VPS11-206ENST00000614944 KBTBD7Q8WVZ9 684 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 DDX50Q9BQ39 737 aaKnown RBP9.05□□□□□ -0.96
VPS11-206ENST00000614944 WNT8AQ9H1J5 351 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 FARSBQ9NSD9 589 aaKnown RBP9.05□□□□□ -0.96
VPS11-206ENST00000614944 POLIQ9UNA4 740 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 COQ6Q9Y2Z9 468 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 HES2Q9Y543 173 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 NLRC5Q86WI3 1866 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 ABHD14A-ACY1A0A1B0GW23 586 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 MACROD2A1Z1Q3 448 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 SYCE1LA8MT33 242 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 GUCY1B2O75343 617 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 WEE1P30291 646 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 NFX1Q12986 1120 aaKnown RBP9.05□□□□□ -0.96
VPS11-206ENST00000614944 SOWAHAQ2M3V2 549 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 GLB1LQ6UWU2 654 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 TPCN2Q8NHX9 752 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 PPP1R13LQ8WUF5 828 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 C18orf25Q96B23 403 aaPredicted RBP9.05□□□□□ -0.96
VPS11-206ENST00000614944 DGCR14Q96DF8 476 aaKnown RBP9.05□□□□□ -0.96
VPS11-206ENST00000614944 RBM14Q96PK6 669 aaKnown RBP9.05□□□□□ -0.96
VPS11-206ENST00000614944 COQ7Q99807 217 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 ELOVL4Q9GZR5 314 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 HIPK3Q9H422 1215 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 SMYD3Q9H7B4 428 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 VANGL2Q9ULK5 521 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 TRIM33Q9UPN9 1127 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 TBC1D30Q9Y2I9 924 aa9.05□□□□□ -0.96
VPS11-206ENST00000614944 O00370 1275 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 PODXLO00592 558 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 PFDN6O15212 129 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 KATNA1O75449 491 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 FKBP9O95302 570 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 FTLP02792 175 aaPredicted RBP9.04□□□□□ -0.96
VPS11-206ENST00000614944 S100A6P06703 90 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 KRT19P08727 400 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 KPNA1P52294 538 aaPredicted RBP9.04□□□□□ -0.96
VPS11-206ENST00000614944 ARID5AQ03989 594 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 MEI1Q5TIA1 1274 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 FYB2Q5VWT5 728 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 CD300LGQ6UXG3 332 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 TMC7Q7Z402 723 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 NECAB2Q7Z6G3 386 aa9.04□□□□□ -0.96
VPS11-206ENST00000614944 ITIH5Q86UX2 942 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms