RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PTPN2P17706 415 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 DDX6P26196 483 aaKnown RBP eCLIP11.82□□□□□ -0.52
SLIRP-212ENST00000613856 GABRR2P28476 465 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 HTR7P34969 479 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 NRG1Q02297 640 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-212ENST00000613856 CA9Q16790 459 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 ST3GAL2Q16842 350 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 LONRF2Q1L5Z9 754 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 ZC3H12AQ5D1E8 599 aaKnown RBP11.82□□□□□ -0.52
SLIRP-212ENST00000613856 NUGGCQ68CJ6 796 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 BBS12Q6ZW61 710 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 GAREM2Q75VX8 874 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 ANKS1BQ7Z6G8 1248 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 HS6ST3Q8IZP7 471 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 SPATA4Q8NEY3 305 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 MRPS31Q92665 395 aaKnown RBP11.82□□□□□ -0.52
SLIRP-212ENST00000613856 PLD4Q96BZ4 506 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 KCTD15Q96SI1 283 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-212ENST00000613856 HERPUD2Q9BSE4 406 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 TKTL2Q9H0I9 626 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 DHX35Q9H5Z1 703 aaKnown RBP11.82□□□□□ -0.52
SLIRP-212ENST00000613856 ANLNQ9NQW6 1124 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 SPATA6Q9NWH7 488 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-212ENST00000613856 GPATCH2LQ9NWQ4 482 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 SMARCAL1Q9NZC9 954 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 ZMYM5Q9UJ78 669 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 CHD8Q9HCK8 2581 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 SLC12A8A0AV02 714 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 H3BRJ5 948 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 TJP3O95049 919 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 TBX18O95935 607 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 APOEP02649 317 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 ARL4AP40617 200 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 HCAR3P49019 387 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 STARD6P59095 220 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 TUBB4BP68371 445 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 COG7P83436 770 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 CSTF1Q05048 431 aaKnown RBP11.81□□□□□ -0.52
SLIRP-212ENST00000613856 SIX1Q15475 284 aaPredicted RBP11.81□□□□□ -0.52
SLIRP-212ENST00000613856 LPAL2Q16609 132 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 CYP1B1Q16678 543 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 PDZD4Q76G19 769 aaPredicted RBP11.81□□□□□ -0.52
SLIRP-212ENST00000613856 MIB1Q86YT6 1006 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 ATP6V0D2Q8N8Y2 350 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 C12orf50Q8NA57 414 aaPredicted RBP11.81□□□□□ -0.52
SLIRP-212ENST00000613856 RNF34Q969K3 372 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 RNF157Q96PX1 679 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 CORO1BQ9BR76 489 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 CALN1Q9BXU9 219 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 NACA2Q9H009 215 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 SLC2A4RGQ9NR83 387 aa11.81□□□□□ -0.52
SLIRP-212ENST00000613856 DNMT3BQ9UBC3 853 aaKnown RBP11.81□□□□□ -0.52
SLIRP-212ENST00000613856 SMG5Q9UPR3 1016 aaKnown RBP11.81□□□□□ -0.52
SLIRP-212ENST00000613856 C2orf78A6NCI8 922 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 SHISA7A6NL88 538 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 EFCAB8A8MWE9 144 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 KRIT1O00522 736 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 MOSPD3O75425 235 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 PAGE1O75459 146 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 LATS1O95835 1130 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 RHOP08100 348 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 MYL4P12829 197 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 IL4RP24394 825 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 HOXC13P31276 330 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 SLC7A9P82251 487 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 CYP4F8P98187 520 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 TFDP2Q14188 446 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 UBXN2BQ14CS0 331 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 ANKRD20A8PQ5CZ79 823 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 PPP6R3Q5H9R7 873 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-212ENST00000613856 PRSS36Q5K4E3 855 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 MANEALQ5VSG8 457 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 SLC9A4Q6AI14 798 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 POTEHQ6S545 545 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 UNC45BQ8IWX7 931 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 MMGT1Q8N4V1 131 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 SHKBP1Q8TBC3 707 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 AZIN2Q96A70 460 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 ZFRQ96KR1 1074 aaKnown RBP11.8□□□□□ -0.52
SLIRP-212ENST00000613856 BTN2A3PQ96KV6 586 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 C1orf74Q96LT6 269 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 CSPG4P5Q96PW8 444 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 EPAS1Q99814 870 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 KLF16Q9BXK1 252 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-212ENST00000613856 FRMD8P1Q9BZ68 369 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-212ENST00000613856 PIDD1Q9HB75 910 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 TMPRSS4Q9NRS4 437 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 HOMER3Q9NSC5 361 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 RBM12Q9NTZ6 932 aaKnown RBP11.8□□□□□ -0.52
SLIRP-212ENST00000613856 HCFC1R1Q9NWW0 138 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 SLC12A6Q9UHW9 1150 aa11.8□□□□□ -0.52
SLIRP-212ENST00000613856 FRYQ5TBA9 3013 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 RALGAPA1Q6GYQ0 2036 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 TRAV19A0A0A6YYK7 116 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 A0A1W2PRU2 124 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 TCRBV7S2A1N4TA0A589 114 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 APOC4-APOC2K7ER74 178 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 EEF2KO00418 725 aaKnown RBP11.79□□□□□ -0.52
SLIRP-212ENST00000613856 ZNF197O14709 1029 aa11.79□□□□□ -0.52
SLIRP-212ENST00000613856 PHF2O75151 1096 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms