RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 GNASQ5JWF2 1037 aa14.47□□□□□ -0.09
PCDHGA3-202ENST00000612467 N4BP2L1Q5TBK1 243 aaPredicted RBP14.47□□□□□ -0.09
PCDHGA3-202ENST00000612467 PACS1Q6VY07 963 aa14.47□□□□□ -0.09
PCDHGA3-202ENST00000612467 CAB39LQ9H9S4 337 aa14.47□□□□□ -0.09
PCDHGA3-202ENST00000612467 XAB2Q9HCS7 855 aaKnown RBP14.47□□□□□ -0.09
PCDHGA3-202ENST00000612467 TMLHEQ9NVH6 421 aa14.47□□□□□ -0.09
PCDHGA3-202ENST00000612467 GTF2IRD1Q9UHL9 959 aa14.47□□□□□ -0.09
PCDHGA3-202ENST00000612467 RPS6KL1Q9Y6S9 549 aa14.47□□□□□ -0.09
PCDHGA3-202ENST00000612467 SDR42E2A6NKP2 422 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 CHRNA1P02708 482 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 PTPN3P26045 913 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 ARRB2P32121 409 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 MAP2K2P36507 400 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 SLC8A3P57103 927 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 RCN2Q14257 317 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 CERCAMQ5T4B2 595 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 AGMOQ6ZNB7 445 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 ARHGAP36Q6ZRI8 547 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 MAGEC3Q8TD91 643 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 PTCD3Q96EY7 689 aaKnown RBP14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 INPP5FQ9Y2H2 1132 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 TSC2P49815 1807 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 ARL5CA6NH57 179 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 ITGB1P05556 798 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 ENO1P06733 434 aaKnown RBP14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 BDNFP23560 247 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 ALDH18A1P54886 795 aaKnown RBP14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 TPI1P60174 286 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 NIPAL4Q0D2K0 466 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 UBAP2LQ14157 1087 aaKnown RBP14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 BNIPLQ7Z465 357 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 RASSF3Q86WH2 238 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 SCAMP5Q8TAC9 235 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 N4BP2L2Q92802 583 aaPredicted RBP14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 MFSD3Q96ES6 412 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 ZNF778Q96MU6 729 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 SLC2A13Q96QE2 648 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 ARHGAP39Q9C0H5 1083 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 PPARGC1AQ9UBK2 798 aaKnown RBP14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 STAP1Q9ULZ2 295 aa14.46□□□□□ -0.09
PCDHGA3-202ENST00000612467 MGEA5O60502 916 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 SRGAP2BP0DMP2 458 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 PTPN4P29074 926 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 LRPAP1P30533 357 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 CD68P34810 354 aaPredicted RBP14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 SESN3P58005 492 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 CDC42EP1Q00587 391 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 OCRLQ01968 901 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 FASTKD1Q53R41 847 aaKnown RBP14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 LRRC8BQ6P9F7 803 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 TNS4Q8IZW8 715 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 ZNF669Q96BR6 464 aaPredicted RBP14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 LRRC39Q96DD0 335 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 ZNF570Q96NI8 536 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 RAB3IPQ96QF0 476 aaPredicted RBP14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 RTP3Q9BQQ7 232 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 OXCT2Q9BYC2 517 aaPredicted RBP14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 FRMD8Q9BZ67 464 aaPredicted RBP14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 SIK2Q9H0K1 926 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 EBF2Q9HAK2 575 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 SIRPGQ9P1W8 387 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 ZNF487B1APH4 448 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 PRKCGP05129 697 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 BPGMP07738 259 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 MRPS6P82932 125 aaKnown RBP14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 LGSNQ5TDP6 509 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 ARCQ7LC44 396 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 BHLHA9Q7RTU4 235 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 PLD6Q8N2A8 252 aaKnown RBP14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 ATP2A3Q93084 1043 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 MYLPFQ96A32 169 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 CLPTM1LQ96KA5 538 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 TKTL2Q9H0I9 626 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 TMEM216Q9P0N5 145 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 C15orf41Q9Y2V0 281 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 SCN4AP35499 1836 aa14.45□□□□□ -0.1
PCDHGA3-202ENST00000612467 THP07101 528 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 ITGA2BP08514 1039 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 CCND1P24385 295 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 CD52P31358 61 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 SCNN1AP37088 669 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 IRF9Q00978 393 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 PDE1BQ01064 536 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 KDSRQ06136 332 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 PDK1Q15118 436 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 KHDC1Q4VXA5 237 aaKnown RBP14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 CCDC91Q7Z6B0 441 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 PNPLA1Q8N8W4 532 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 DNAAF3Q8N9W5 541 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 INPP5DQ92835 1189 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 NUDCD1Q96RS6 583 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 MLPHQ9BV36 600 aaPredicted RBP14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 SHCBP1LQ9BZQ2 653 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 TAS2R1Q9NYW7 299 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 HHLA1C9JL84 531 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 NFKB1P19838 968 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 CRHR1P34998 444 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 FDFT1P37268 417 aa14.44□□□□□ -0.1
PCDHGA3-202ENST00000612467 GLUD2P49448 558 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms