RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ZSCAN5CA6NGD5 496 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-217ENST00000611848 OTOL1A6NHN0 477 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-217ENST00000611848 SCAMP3O14828 347 aaKnown RBP9.14□□□□□ -0.95
SMAD4-217ENST00000611848 NCAM2O15394 837 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 MSI1O43347 362 aaKnown RBP9.14□□□□□ -0.95
SMAD4-217ENST00000611848 IGLV3-25P01717 112 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 IGLV3-27P01718 113 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 KLKB1P03952 638 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 CYP17A1P05093 508 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 AOC1P19801 751 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 GGCXP38435 758 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 MATKP42679 507 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 SOX9P48436 509 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 PEX5P50542 639 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 GAD2Q05329 585 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 PTP4A2Q12974 167 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 CUL1Q13616 776 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 PPP2R5EQ16537 467 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 C2CD6Q53TS8 623 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 LY6G5CQ5SRR4 150 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 CWF19L1Q69YN2 538 aaKnown RBP9.14□□□□□ -0.95
SMAD4-217ENST00000611848 ASTLQ6HA08 431 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-217ENST00000611848 RHBDF2Q6PJF5 856 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 MON1BQ7L1V2 547 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 ZNF771Q7L3S4 317 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-217ENST00000611848 TAC4Q86UU9 113 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 CPXM2Q8N436 756 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 TSEN2Q8NCE0 465 aaKnown RBP9.14□□□□□ -0.95
SMAD4-217ENST00000611848 SEC14L1Q92503 715 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 ALG3Q92685 438 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 SLC39A13Q96H72 371 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 AP1M1Q9BXS5 423 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 SPHK2Q9NRA0 654 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 VPS18Q9P253 973 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 AGO1Q9UL18 857 aaKnown RBP9.14□□□□□ -0.95
SMAD4-217ENST00000611848 NFU1Q9UMS0 254 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 CACNA1IQ9P0X4 2223 aa9.14□□□□□ -0.95
SMAD4-217ENST00000611848 ESYT3A0FGR9 886 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 SHISA7A6NL88 538 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 FAM170BA6NMN3 283 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 GOLGA8SH3BPF8 625 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 TRDMT1O14717 391 aaKnown RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 IRAK2O43187 625 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 RNF40O75150 1001 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 APOEP02649 317 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 FGGP02679 453 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 FAM153BP0C7A2 387 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 SLC2A3P11169 496 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 ADH5P11766 374 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 CTNNA2P26232 953 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 ECHS1P30084 290 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 MAGEA9P43362 315 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 GYS2P54840 703 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 MTA1Q13330 715 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 EIF4EBP2Q13542 120 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 UBXN2BQ14CS0 331 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 FAM153CQ494X1 144 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 ADGRF1Q5T601 910 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 TXNDC11Q6PKC3 985 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 MAATS1Q7Z4T9 603 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 DENND1CQ8IV53 801 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 FAM217AQ8IXS0 508 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 MCOLN2Q8IZK6 566 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 IQCKQ8N0W5 287 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 UBL4BQ8N7F7 174 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 C3orf20Q8ND61 904 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 PJA1Q8NG27 643 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 CCDC26Q8TAB7 109 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 ADAM32Q8TC27 787 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 NT5C3BQ969T7 300 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 PGAP3Q96FM1 320 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 NPY6RQ99463 290 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 NUP85Q9BW27 656 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 FOXQ1Q9C009 403 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 ZMYND15Q9H091 742 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 FAM204AQ9H8W3 233 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 MARK1Q9P0L2 795 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 FAM153AQ9UHL3 310 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 SLC12A6Q9UHW9 1150 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 STOML2Q9UJZ1 356 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 SIT1Q9Y3P8 196 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 FAM170AA1A519 330 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 SIGLEC16A6NMB1 481 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 HOXC11O43248 304 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 F9P00740 461 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 MYBL1P10243 752 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 KRT3P12035 628 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 CD72P21854 359 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 COMTP21964 271 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 TARSP26639 723 aaKnown RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 AVPR2P30518 371 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 CCR1P32246 355 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 EIF2DP41214 584 aaKnown RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 SLC11A2P49281 568 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 GRSF1Q12849 480 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 PPP2R5DQ14738 602 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 PON2Q15165 354 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 TRADDQ15628 312 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms