RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 COPEO14579 308 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 MGAT1P26572 445 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 SERPINB6P35237 376 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 SESN2P58004 480 aaPredicted RBP28.81■■■□□ 2.2
CSPG5-205ENST00000610462 GALNT2Q10471 571 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 CASC4Q6P4E1 433 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 TRAF7Q6Q0C0 670 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 OTOAQ7RTW8 1153 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 CHSY1Q86X52 802 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 FITM2Q8N6M3 262 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 DEPDC1BQ8WUY9 529 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 RNF34Q969K3 372 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 GLT1D1Q96MS3 346 aa28.81■■■□□ 2.2
CSPG5-205ENST00000610462 MTSS1O43312 755 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 AOC2O75106 756 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 LRIG2O94898 1065 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 CCNFP41002 786 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 CCDC15Q0P6D6 951 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 ARNTL2Q8WYA1 636 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 FAM111AQ96PZ2 611 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 NAT9Q9BTE0 207 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 OSBPL2Q9H1P3 480 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 MANSC1Q9H8J5 431 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 SHROOM3Q8TF72 1996 aa28.8■■■□□ 2.2
CSPG5-205ENST00000610462 RFPL1O75677 317 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 RASSF9O75901 435 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 PGAM1P18669 254 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 EPHB2P29323 1055 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 CYP2C18P33260 490 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 EIF4EBP2Q13542 120 aaPredicted RBP28.79■■■□□ 2.2
CSPG5-205ENST00000610462 SLC24A5Q71RS6 500 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 TTC17Q96AE7 1141 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 TRPV6Q9H1D0 765 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 USH1CQ9Y6N9 552 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 NUP205Q92621 2012 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 MOXD2PA6NHM9 499 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 B4GALT3O60512 393 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 DDHD2O94830 711 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 CRADDP78560 199 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 BNIP1Q12981 228 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 ZNF280BQ86YH2 543 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 SRPK1Q96SB4 655 aaKnown RBP28.79■■■□□ 2.2
CSPG5-205ENST00000610462 ABCC13Q9NSE7 274 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 MKS1Q9NXB0 559 aa28.79■■■□□ 2.2
CSPG5-205ENST00000610462 HOXD10P28358 340 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 GARSP41250 739 aaKnown RBP28.78■■■□□ 2.2
CSPG5-205ENST00000610462 DSC1Q08554 894 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 BMPR2Q13873 1038 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 MBTPS1Q14703 1052 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 MARK2Q7KZI7 788 aaKnown RBP28.78■■■□□ 2.2
CSPG5-205ENST00000610462 THOC1Q96FV9 657 aaKnown RBP28.78■■■□□ 2.2
CSPG5-205ENST00000610462 IQCGQ9H095 443 aaKnown RBP28.78■■■□□ 2.2
CSPG5-205ENST00000610462 ARHGEF38Q9NXL2 777 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 MYO16Q9Y6X6 1858 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 TNFRSF10BO14763 440 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 CNTFP26441 200 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 GRIK1P39086 918 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 SLC5A3P53794 718 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 FAM189BP81408 668 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 CLLU1OSQ5K130 101 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 LINC01599Q8WXQ3 324 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 GORASP1Q9BQQ3 440 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 PIH1D1Q9NWS0 290 aaKnown RBP28.78■■■□□ 2.2
CSPG5-205ENST00000610462 SYBUQ9NX95 663 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 TRHDEQ9UKU6 1024 aa28.78■■■□□ 2.2
CSPG5-205ENST00000610462 IRAK2O43187 625 aa28.77■■■□□ 2.2
CSPG5-205ENST00000610462 NIPAL4Q0D2K0 466 aa28.77■■■□□ 2.2
CSPG5-205ENST00000610462 NOMO2Q5JPE7 1267 aa28.77■■■□□ 2.2
CSPG5-205ENST00000610462 BTBD8Q5XKL5 378 aa28.77■■■□□ 2.2
CSPG5-205ENST00000610462 URGCPQ8TCY9 931 aa28.77■■■□□ 2.2
CSPG5-205ENST00000610462 HMX2A2RU54 273 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 TMEM189-UBE2V1I3L0A0 370 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 CRYMQ14894 314 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 BRMS1LQ5PSV4 323 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 C10orf82Q8WW14 230 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 TSEN34Q9BSV6 310 aaKnown RBP28.76■■■□□ 2.19
CSPG5-205ENST00000610462 ZBTB24O43167 697 aaPredicted RBP28.76■■■□□ 2.19
CSPG5-205ENST00000610462 AP2A1O95782 977 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 FYB2Q5VWT5 728 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 TIFABQ6ZNK6 161 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 CDHR3Q6ZTQ4 885 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 CDKL2Q92772 493 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 PTPRN2Q92932 1015 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 VAT1Q99536 393 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 GBA3Q9H227 469 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 ECT2Q9H8V3 914 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 ALG13Q9NP73 1137 aaKnown RBP28.76■■■□□ 2.19
CSPG5-205ENST00000610462 PLLPQ9Y342 182 aa28.76■■■□□ 2.19
CSPG5-205ENST00000610462 NCALDP61601 193 aa28.75■■■□□ 2.19
CSPG5-205ENST00000610462 NAB1Q13506 487 aa28.75■■■□□ 2.19
CSPG5-205ENST00000610462 MROH9Q5TGP6 573 aa28.75■■■□□ 2.19
CSPG5-205ENST00000610462 COLGALT2Q8IYK4 626 aa28.75■■■□□ 2.19
CSPG5-205ENST00000610462 UNC5BQ8IZJ1 945 aa28.75■■■□□ 2.19
CSPG5-205ENST00000610462 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.74■■■□□ 2.19
CSPG5-205ENST00000610462 OR4Q2P0C623 313 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 HNRNPH1P31943 449 aaKnown RBP28.74■■■□□ 2.19
CSPG5-205ENST00000610462 SERPINB4P48594 390 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 SLC39A12Q504Y0 691 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 TEX44Q53QW1 395 aa28.74■■■□□ 2.19
CSPG5-205ENST00000610462 ITPRIPL1Q6GPH6 555 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms