RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 MRPL43Q8N983 215 aaKnown RBP12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GLIS1Q8NBF1 620 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 LEMD2Q8NC56 503 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TSEN2Q8NCE0 465 aaKnown RBP12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 MCUQ8NE86 351 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 GPR152Q8TDT2 470 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 CPT1BQ92523 772 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PRCCQ92733 491 aaPredicted RBP12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 EXOC4Q96A65 974 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 SPATA13Q96N96 652 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PRMT1Q99873 361 aaKnown RBP12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TMEM109Q9BVC6 243 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PPCSQ9HAB8 311 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TMPRSS4Q9NRS4 437 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TMEM248Q9NWD8 314 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 TRHDEQ9UKU6 1024 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 PCDHA11Q9Y5I1 949 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 NR2E3Q9Y5X4 410 aa12.65□□□□□ -0.38
NEDD8-MDP1-203ENST00000604306 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SLC12A8A0AV02 714 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 C2orf71A6NGG8 1288 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 DRGXA6NNA5 263 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ERI2A8K979 691 aaKnown RBP12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 LPXNO60711 386 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PAPLNO95428 1278 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CXCL14O95715 111 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 GLUD1P00367 558 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 LRG1P02750 347 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CCNCP24863 283 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CDC25CP30307 473 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MAPKAPK2P49137 400 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SLC11A2P49281 568 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SEMA5AQ13591 1074 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TRIP13Q15645 432 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 UAP1Q16222 522 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MS4A13Q5J8X5 152 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PIK3R6Q5UE93 754 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TTC39BQ5VTQ0 682 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TIGD7Q6NT04 549 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ELMSAN1Q6PJG2 1045 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CENPUQ71F23 418 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 DNAJB7Q7Z6W7 309 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 NLRP14Q86W24 1093 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 UMODL1-AS1Q8N2C9 162 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SPPL3Q8TCT6 385 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 DPF3Q92784 378 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 LRRC39Q96DD0 335 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 DDX50Q9BQ39 737 aaKnown RBP12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TCF25Q9BQ70 676 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZYG11BQ9C0D3 744 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PRDM12Q9H4Q4 367 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ENTPD7Q9NQZ7 604 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 IGSF9Q9P2J2 1179 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 STOML2Q9UJZ1 356 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MAGED2Q9UNF1 606 aaPredicted RBP12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ATP8A1Q9Y2Q0 1164 aa12.64□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 GOLGA8KD6RF30 607 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 H0YGN5 161 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RRP9O43818 475 aaKnown RBP12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TTC4O95801 387 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 F11P03951 625 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 HNRNPA1P09651 372 aaKnown RBP eCLIP12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZSCAN5DPP0CG00 497 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 DNAJB2P25686 324 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 DDX6P26196 483 aaKnown RBP eCLIP12.63□□□□□ -0.391e-6■■■□□ 15.5
NEDD8-MDP1-203ENST00000604306 HARS2P49590 506 aaKnown RBP12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 VPS41P49754 854 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 EPHA5P54756 1037 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ARL4CP56559 192 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 YBEYP58557 167 aaPredicted RBP12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 AUHQ13825 339 aaKnown RBP12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 HIF1AQ16665 826 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ARMC3Q5W041 872 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 DENND2CQ68D51 928 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ITPRIPL1Q6GPH6 555 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 KLHDC8BQ8IXV7 354 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 KREMEN2Q8NCW0 462 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 UBLCP1Q8WVY7 318 aaPredicted RBP12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 P2RY11Q96G91 374 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZIM3Q96PE6 472 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TGS1Q96RS0 853 aaKnown RBP12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MAGEB5Q9BZ81 275 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ROPN1BQ9BZX4 212 aaPredicted RBP12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 LMAN2LQ9H0V9 348 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CCSER2Q9H7U1 834 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ROPN1Q9HAT0 212 aaPredicted RBP12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 IL21Q9HBE4 155 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 NFS1Q9Y697 457 aa12.63□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 LCHNA4D1U4 455 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 GOLGA6L10A6NI86 522 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 AGPSO00116 658 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 AP3B1O00203 1094 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ALOX15BO15296 676 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RIPK2O43353 540 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 COCHO43405 550 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ACSL4O60488 711 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SPAG6O75602 509 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TCEA3O75764 348 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 C8AP07357 584 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms