RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 HNRNPA1L2Q32P51 320 aaKnown RBP8.64□□□□□ -1.03
CCDC9-206ENST00000601154 FSCBQ5H9T9 825 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 NUGGCQ68CJ6 796 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 NADSYN1Q6IA69 706 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 PMF1Q6P1K2 205 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 MSANTD2Q6P1R3 559 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 MMAAQ8IVH4 418 aaKnown RBP8.64□□□□□ -1.03
CCDC9-206ENST00000601154 UNC45BQ8IWX7 931 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 PDCD7Q8N8D1 485 aaKnown RBP8.64□□□□□ -1.03
CCDC9-206ENST00000601154 HJURPQ8NCD3 748 aaPredicted RBP8.64□□□□□ -1.03
CCDC9-206ENST00000601154 PIP4K2CQ8TBX8 421 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 ADAM32Q8TC27 787 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 KCTD13Q8WZ19 329 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 ERCC4Q92889 916 aaPredicted RBP8.64□□□□□ -1.03
CCDC9-206ENST00000601154 KAT5Q92993 513 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 MYO19Q96H55 970 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 CNDP2Q96KP4 475 aaKnown RBP8.64□□□□□ -1.03
CCDC9-206ENST00000601154 ELF4Q99607 663 aaPredicted RBP8.64□□□□□ -1.03
CCDC9-206ENST00000601154 TSG101Q99816 390 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 OMDQ99983 421 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 ZSWIM1Q9BR11 485 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 NUCKS1Q9H1E3 243 aaKnown RBP8.64□□□□□ -1.03
CCDC9-206ENST00000601154 NEUROG2Q9H2A3 272 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 EBF2Q9HAK2 575 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 SCUBE2Q9NQ36 999 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 INTS6Q9UL03 887 aaKnown RBP8.64□□□□□ -1.03
CCDC9-206ENST00000601154 PCDHB4Q9Y5E5 795 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 ADAMTS20P59510 1910 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 CELSR3Q9NYQ7 3312 aa8.64□□□□□ -1.03
CCDC9-206ENST00000601154 CKAP5Q14008 2032 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 PLXNB3Q9ULL4 1909 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 FAM237AA0A1B0GTK4 181 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 A0A1W2PPC4 97 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 LRRC72A6NJI9 287 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 ENC1O14682 589 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 VILLO15195 856 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 SLC16A3O15427 465 aaKnown RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 IRAK2O43187 625 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 RNASEH1O60930 286 aaKnown RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 ZIC2O95409 532 aaPredicted RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 LDOC1O95751 146 aaPredicted RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 IGLV3-27P01718 113 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 ASLP04424 464 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 ITGAVP06756 1048 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 TBXAS1P24557 533 aaPredicted RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 ABCG1P45844 678 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 STK19P49842 368 aaPredicted RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 SEMG2Q02383 582 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 PKDCCQ504Y2 493 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 PITRM1Q5JRX3 1037 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 RNF219Q5W0B1 726 aaPredicted RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 ANKRD40Q6AI12 368 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 LCLAT1Q6UWP7 414 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 USP30Q70CQ3 517 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 CCDC117Q8IWD4 279 aaPredicted RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 PPM1KQ8N3J5 372 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 EID2Q8N6I1 236 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 UBR7Q8N806 425 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 OR14C36Q8NHC7 312 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 FIBINQ8TAL6 211 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 DQX1Q8TE96 717 aaKnown RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 IRGQQ8WZA9 623 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 SLC35C1Q96A29 364 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 FAM149B1Q96BN6 582 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 LMLNQ96KR4 655 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 RPL10LQ96L21 214 aaKnown RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 FCRL2Q96LA5 508 aaPredicted RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 MRGPRX3Q96LB0 322 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 ST7Q9NRC1 585 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 DKK4Q9UBT3 224 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 ARMCX3Q9UH62 379 aaPredicted RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 XPO7Q9UIA9 1087 aaKnown RBP8.63□□□□□ -1.03
CCDC9-206ENST00000601154 ERVW-1Q9UQF0 538 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 ZDHHC9Q9Y397 364 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 COQ4Q9Y3A0 265 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 NUMA1Q14980 2115 aa8.63□□□□□ -1.03
CCDC9-206ENST00000601154 SMG1Q96Q15 3661 aaKnown RBP8.62□□□□□ -1.03
CCDC9-206ENST00000601154 A0A087WV48 116 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 A0A1W2PQ27 194 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 A0A1W2PQ64 194 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 RNF225M0QZC1 329 aaPredicted RBP8.62□□□□□ -1.03
CCDC9-206ENST00000601154 RFPL3O75679 317 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 LUC7L3O95232 432 aaKnown RBP8.62□□□□□ -1.03
CCDC9-206ENST00000601154 PRB1P04280 392 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 PAEPP09466 180 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 JUPP14923 745 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 VAV1P15498 845 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 ITPKBP27987 946 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 CD38P28907 300 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 EPHA8P29322 1005 aaPredicted RBP8.62□□□□□ -1.03
CCDC9-206ENST00000601154 SLC8A1P32418 973 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 HNF1BP35680 557 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 METAP1P53582 386 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 ADPRHP54922 357 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 PPP2CBP62714 309 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 PPP2CAP67775 309 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 FKBP3Q00688 224 aaKnown RBP8.62□□□□□ -1.03
CCDC9-206ENST00000601154 KCNJ12Q14500 433 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 SHBQ15464 509 aa8.62□□□□□ -1.03
CCDC9-206ENST00000601154 POM121L1PQ3SYA9 428 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms