RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 PGGT1BP53609 377 aa16.5■□□□□ 0.23
SYDE1-204ENST00000600440 TRIM16LQ309B1 348 aa16.5■□□□□ 0.23
SYDE1-204ENST00000600440 ZBTB49Q6ZSB9 765 aa16.5■□□□□ 0.23
SYDE1-204ENST00000600440 CPXCR1Q8N123 301 aa16.5■□□□□ 0.23
SYDE1-204ENST00000600440 KCTD17Q8N5Z5 321 aa16.5■□□□□ 0.23
SYDE1-204ENST00000600440 NDEL1Q9GZM8 345 aa16.5■□□□□ 0.23
SYDE1-204ENST00000600440 PNPLA3Q9NST1 481 aa16.5■□□□□ 0.23
SYDE1-204ENST00000600440 RBAKQ9NYW8 714 aaPredicted RBP16.5■□□□□ 0.23
SYDE1-204ENST00000600440 FAM32AQ9Y421 112 aaKnown RBP16.5■□□□□ 0.23
SYDE1-204ENST00000600440 AP4S1Q9Y587 144 aa16.5■□□□□ 0.23
SYDE1-204ENST00000600440 GPC6Q9Y625 555 aaPredicted RBP16.5■□□□□ 0.23
SYDE1-204ENST00000600440 TIPRLO75663 272 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 IDO1P14902 403 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 CPA3P15088 417 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 TFE3P19532 575 aaPredicted RBP16.49■□□□□ 0.23
SYDE1-204ENST00000600440 ACAT1P24752 427 aaKnown RBP16.49■□□□□ 0.23
SYDE1-204ENST00000600440 YAP1P46937 504 aaKnown RBP16.49■□□□□ 0.23
SYDE1-204ENST00000600440 FSTL1Q12841 308 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 PTK2BQ14289 1009 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 WDR78Q5VTH9 848 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 AMIGO3Q86WK7 504 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 TICAM1Q8IUC6 712 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 GABPB2Q8TAK5 448 aaPredicted RBP16.49■□□□□ 0.23
SYDE1-204ENST00000600440 XPNPEP3Q9NQH7 507 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 BCAP29Q9UHQ4 241 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 CORINQ9Y5Q5 1042 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 AKAP10O43572 662 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 GLRA3O75311 464 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 RAD17O75943 681 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 IL1R1P14778 569 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 NR4A1P22736 598 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 EN1Q05925 392 aaPredicted RBP16.49■□□□□ 0.23
SYDE1-204ENST00000600440 NAPRTQ6XQN6 538 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 SNX29P2Q8IUI4 249 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 TMEM102Q8N9M5 508 aaPredicted RBP16.49■□□□□ 0.23
SYDE1-204ENST00000600440 TFAP2BQ92481 460 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 MPHOSPH6Q99547 160 aaKnown RBP16.49■□□□□ 0.23
SYDE1-204ENST00000600440 EHMT1Q9H9B1 1298 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 POLR1BQ9H9Y6 1135 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 COPG2Q9UBF2 871 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 NXF1Q9UBU9 619 aaKnown RBP16.49■□□□□ 0.23
SYDE1-204ENST00000600440 SFMBT1Q9UHJ3 866 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 ZNF541Q9H0D2 1346 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 FAM149AA5PLN7 773 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 CSDE1O75534 798 aaKnown RBP16.49■□□□□ 0.23
SYDE1-204ENST00000600440 KCNH1O95259 989 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 VAPBO95292 243 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 TSHRP16473 764 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 PRKCHP24723 683 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 BMXP51813 675 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 PTPN20Q4JDL3 420 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 PIGGQ5H8A4 983 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 OFCC1Q8IZS5 231 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 CYGBQ8WWM9 190 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 SLC2A11Q9BYW1 496 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 UNKQ9C0B0 810 aaKnown RBP16.49■□□□□ 0.23
SYDE1-204ENST00000600440 TMED5Q9Y3A6 229 aa16.49■□□□□ 0.23
SYDE1-204ENST00000600440 MAPTP10636 758 aaKnown RBP16.48■□□□□ 0.23
SYDE1-204ENST00000600440 CARTPTQ16568 116 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 ZNF829Q3KNS6 432 aaPredicted RBP16.48■□□□□ 0.23
SYDE1-204ENST00000600440 METTL21CQ5VZV1 264 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 DENND1BQ6P3S1 775 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 GALNT18Q6P9A2 607 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 ACER1Q8TDN7 264 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 HPS1Q92902 700 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 KLHL25Q9H0H3 589 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 AGO2Q9UKV8 859 aaKnown RBP16.48■□□□□ 0.23
SYDE1-204ENST00000600440 TMEM98Q9Y2Y6 226 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 RGSL1A5PLK6 1076 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 ZNF195O14628 629 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 CHADO15335 359 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 C4BPAP04003 597 aaKnown RBP16.48■□□□□ 0.23
SYDE1-204ENST00000600440 MAP4P27816 1152 aaKnown RBP16.48■□□□□ 0.23
SYDE1-204ENST00000600440 PRDX6P30041 224 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 RGS21Q2M5E4 152 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 LSM12Q3MHD2 195 aaKnown RBP16.48■□□□□ 0.23
SYDE1-204ENST00000600440 SLC15A4Q8N697 577 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 FAM110BQ8TC76 370 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 CEP41Q9BYV8 373 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 CDH19Q9H159 772 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 GID8Q9NWU2 228 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 PAK5Q9P286 719 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 NARFQ9UHQ1 456 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 ZNHIT2Q9UHR6 403 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 USP18Q9UMW8 372 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 AURKCQ9UQB9 309 aa16.48■□□□□ 0.23
SYDE1-204ENST00000600440 PRSS51A0A1B0GVH4 220 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 CST3P01034 146 aaPredicted RBP16.47■□□□□ 0.23
SYDE1-204ENST00000600440 ATP2B4P23634 1241 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 THNSL1Q8IYQ7 743 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 TBC1D15Q8TC07 691 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 DRC3Q9H069 523 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 DAPK2Q9UIK4 370 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 PRPF19Q9UMS4 504 aaKnown RBP16.47■□□□□ 0.23
SYDE1-204ENST00000600440 CDY2AQ9Y6F7 541 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 CDY1Q9Y6F8 540 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 ZNF839A8K0R7 811 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 CFAP99D6REC4 459 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 H3BMQ9 156 aa16.47■□□□□ 0.23
SYDE1-204ENST00000600440 NOL3O60936 208 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms