RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ARHGEF19Q8IW93 802 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 EID2Q8N6I1 236 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 HPDLQ96IR7 371 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 EDEM3Q9BZQ6 932 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 GDAP2Q9NXN4 497 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 PLK2Q9NYY3 685 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 APEX2Q9UBZ4 518 aa14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-218ENST00000598907 GABRDO14764 452 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 KLK10O43240 276 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 ITGAVP06756 1048 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 PDGFRBP09619 1106 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 UCHL3P15374 230 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 ACSL1P33121 698 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 CACNA2D1P54289 1103 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 C21orf59P57076 290 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 NFKB2Q00653 900 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 GCNT1Q02742 428 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 SOWAHAQ2M3V2 549 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 ZNF699Q32M78 642 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 SMYD5Q6GMV2 418 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 SPOPLQ6IQ16 392 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 TOP6BLQ8N6T0 577 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 NEK11Q8NG66 645 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 KCNE4Q8WWG9 221 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 FBXO32Q969P5 355 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 ELMO3Q96BJ8 720 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 IQCDQ96DY2 449 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 PCED1BQ96HM7 432 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 NT5C1BQ96P26 610 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 FAM207AQ9NSI2 230 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 AJAP1Q9UKB5 411 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 CLCA2Q9UQC9 943 aa14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.52□□□□□ -0.09
SHKBP1-218ENST00000598907 A0A1B0GTQ1 180 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 A0A1W2PQJ5 194 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 RNF225M0QZC1 329 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 C1SP09871 688 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 FAM163BP0C2L3 166 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 CDK4P11802 303 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 COPAP53621 1224 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 VAC14Q08AM6 782 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 LRMPQ12912 555 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 ORC1Q13415 861 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 ZNF667Q5HYK9 610 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 HECTD3Q5T447 861 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 GJB7Q6PEY0 223 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 TMC6Q7Z403 805 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 UBR7Q8N806 425 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 CCDC150Q8NCX0 1101 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 KBTBD7Q8WVZ9 684 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 JAKMIP2Q96AA8 810 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 BIRC7Q96CA5 298 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 PDLIM2Q96JY6 352 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 FAM81BQ96LP2 452 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 PCMTD1Q96MG8 357 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 KREMEN1Q96MU8 473 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 IMPG2Q9BZV3 1241 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 TMEM30AQ9NV96 361 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 ANKMY1Q9P2S6 941 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 CDH9Q9ULB4 789 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 R3HCC1Q9Y3T6 440 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 PCDHB1Q9Y5F3 818 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 FHOD1Q9Y613 1164 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 NUMA1Q14980 2115 aa14.51□□□□□ -0.09
SHKBP1-218ENST00000598907 IGLV3-19P01714 112 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 GYPCP04921 128 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 MPOP05164 745 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 TBXAS1P24557 533 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 ASPAP45381 313 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 CDH8P55286 799 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 JAM2P57087 298 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 POLR2FP61218 127 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 CUL2Q13617 745 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 TRIM14Q14142 442 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 ARID5BQ14865 1188 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 MAPRE1Q15691 268 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 WDR72Q3MJ13 1102 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 RRAGAQ7L523 313 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 ENOSF1Q7L5Y1 443 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 DPH6Q7L8W6 267 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 KAT5Q92993 513 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 C8orf48Q96LL4 319 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 CEP295NLQ96MC4 621 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 STK33Q9BYT3 514 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 ZNF518BQ9C0D4 1074 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 NIF3L1Q9GZT8 377 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 PCED1AQ9H1Q7 454 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 UBE2TQ9NPD8 197 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 IMPACTQ9P2X3 320 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 CHORDC1Q9UHD1 332 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 DNAJC12Q9UKB3 198 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 CAPN11Q9UMQ6 739 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 PLXNA2O75051 1894 aa14.5□□□□□ -0.09
SHKBP1-218ENST00000598907 PAPSS1O43252 624 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 SEMA4FO95754 770 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 CISD3P0C7P0 127 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 TRIM21P19474 475 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 ACO1P21399 889 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 PRKCHP24723 683 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms