RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 MLNP12872 115 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 PSMC3P17980 439 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 CYP2F1P24903 491 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 TPP2P29144 1249 aaPredicted RBP12.9□□□□□ -0.34
ZNF558-205ENST00000597304 OSTNP61366 133 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 SMAD1Q15797 465 aaKnown RBP12.9□□□□□ -0.34
ZNF558-205ENST00000597304 CCDC14Q49A88 953 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 PPM1LQ5SGD2 360 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 HEATR6Q6AI08 1181 aaKnown RBP12.9□□□□□ -0.34
ZNF558-205ENST00000597304 AGR3Q8TD06 166 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 NLRP7Q8WX94 980 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 SREK1Q8WXA9 508 aaKnown RBP12.9□□□□□ -0.34
ZNF558-205ENST00000597304 ATG4CQ96DT6 458 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 TBCBQ99426 244 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 PKP2Q99959 881 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 NIFKQ9BYG3 293 aaKnown RBP12.9□□□□□ -0.34
ZNF558-205ENST00000597304 ZNF358Q9NW07 568 aa12.9□□□□□ -0.34
ZNF558-205ENST00000597304 RSL24D1Q9UHA3 163 aaKnown RBP12.9□□□□□ -0.34
ZNF558-205ENST00000597304 PRSS51A0A1B0GVH4 220 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 SPDYE16A6NNV3 312 aaPredicted RBP12.9□□□□□ -0.35
ZNF558-205ENST00000597304 TMEM114B3SHH9 223 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 F5H423 210 aaPredicted RBP12.9□□□□□ -0.35
ZNF558-205ENST00000597304 B4GALT4O60513 344 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 CILPO75339 1184 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 PRKCBP05771 671 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 HNRNPCP07910 306 aaKnown RBP eCLIP12.9□□□□□ -0.35
ZNF558-205ENST00000597304 PGAM1P18669 254 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 GMPRP36959 345 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 GBE1Q04446 702 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 LPIN1Q14693 890 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 RSBN1LQ6PCB5 846 aaPredicted RBP12.9□□□□□ -0.35
ZNF558-205ENST00000597304 TNS4Q8IZW8 715 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 RP9Q8TA86 221 aaKnown RBP12.9□□□□□ -0.35
ZNF558-205ENST00000597304 PGBD4Q96DM1 585 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 WNK4Q96J92 1243 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 CNDP1Q96KN2 507 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 HEXIM2Q96MH2 286 aaKnown RBP12.9□□□□□ -0.35
ZNF558-205ENST00000597304 SLC2A11Q9BYW1 496 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 SNX15Q9NRS6 342 aa12.9□□□□□ -0.35
ZNF558-205ENST00000597304 PSME4Q14997 1843 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 GOLGA8QA0A0J9YX86 632 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 GOLGA8OA6NCC3 632 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 KPNA7A9QM74 516 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 GOLGA8NF8WBI6 632 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 MDM4O15151 490 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 CFLARO15519 480 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 TOMM70O94826 608 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 MMP10P09238 476 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 MGAT1P26572 445 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 MSX2P35548 267 aaPredicted RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 TCF7P36402 384 aaPredicted RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 GP5P40197 560 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 PKNOX1P55347 436 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 SESN2P58004 480 aaPredicted RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 SP2Q02086 613 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 SFSWAPQ12872 951 aaKnown RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 CYTH1Q15438 398 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 FKBP1CQ5VVH2 108 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 KCNT2Q6UVM3 1135 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 NAPRTQ6XQN6 538 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 ZNF554Q86TJ5 538 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 SETD3Q86TU7 594 aaPredicted RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 PGAM4Q8N0Y7 254 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 PDCD6IPQ8WUM4 868 aaKnown RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 QKIQ96PU8 341 aaKnown RBP eCLIP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 NEMP1O14524 444 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 VDRP11473 427 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 ENO3P13929 434 aaPredicted RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 CD1EP15812 388 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 ME2P23368 584 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 SDC4P31431 198 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 MS4A2Q01362 244 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 SLC10A2Q12908 348 aaPredicted RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 PPP2R5DQ14738 602 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 PDK1Q15118 436 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 SNRNP48Q6IEG0 339 aaKnown RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 LRRC8BQ6P9F7 803 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 CMC1Q7Z7K0 106 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 ERI1Q8IV48 349 aaKnown RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 LRRC43Q8N309 656 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 TRIML2Q8N7C3 387 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 TSPAN14Q8NG11 270 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 USP13Q92995 863 aaPredicted RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 RCN3Q96D15 328 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 CCT7Q99832 543 aa12.89□□□□□ -0.35
ZNF558-205ENST00000597304 INO80BQ9C086 356 aaPredicted RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 PIH1D1Q9NWS0 290 aaKnown RBP12.89□□□□□ -0.35
ZNF558-205ENST00000597304 NOP56O00567 594 aaKnown RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 DPYSL4O14531 572 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 ATP6V1G1O75348 118 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 CAPNS1P04632 268 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 COL11A1P12107 1806 aaPredicted RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 P4HA1P13674 534 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 ZFXP17010 805 aaPredicted RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 ZNF23P17027 643 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 NR2C2P49116 596 aa12.88□□□□□ -0.35
ZNF558-205ENST00000597304 ATXN3P54252 364 aaPredicted RBP12.88□□□□□ -0.35
ZNF558-205ENST00000597304 CEACAM7Q14002 265 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms