RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 TYW5A2RUC4 315 aaKnown RBP13.5□□□□□ -0.25
LIG1-212ENST00000596549 I6L893 689 aaPredicted RBP13.5□□□□□ -0.25
LIG1-212ENST00000596549 CFIP05156 583 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 POLR2EP19388 210 aaKnown RBP13.5□□□□□ -0.25
LIG1-212ENST00000596549 DPP6P42658 865 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 CTSOP43234 321 aaPredicted RBP13.5□□□□□ -0.25
LIG1-212ENST00000596549 MAPK8P45983 427 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 NUMBP49757 651 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 NOMO3P69849 1222 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 SLC6A3Q01959 620 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 CENPCQ03188 943 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 E2F5Q15329 346 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 C2CD6Q53TS8 623 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 EFHC1Q5JVL4 640 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 TAF3Q5VWG9 929 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 TRNP1Q6NT89 227 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 APCDD1Q8J025 514 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 ATP6V0D2Q8N8Y2 350 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 NOX5Q96PH1 765 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 GPR174Q9BXC1 333 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 NUSAP1Q9BXS6 441 aaKnown RBP13.5□□□□□ -0.25
LIG1-212ENST00000596549 PRSS16Q9NQE7 514 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 ANLNQ9NQW6 1124 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 PIGVQ9NUD9 493 aa13.5□□□□□ -0.25
LIG1-212ENST00000596549 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.5□□□□□ -0.25
LIG1-212ENST00000596549 ITIH6Q6UXX5 1313 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 CACNA1EQ15878 2313 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 F5H5T6 163 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 GIPC1O14908 333 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 NDUFS2O75306 463 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 KCNK5O95279 499 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 ATP5BP06576 529 aaKnown RBP13.49□□□□□ -0.25
LIG1-212ENST00000596549 MMEP08473 750 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 SERPINF2P08697 491 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 MAOBP27338 520 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 CCR1P32246 355 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 GABRB2P47870 512 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 JAM2P57087 298 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 RPS14P62263 151 aaKnown RBP13.49□□□□□ -0.25
LIG1-212ENST00000596549 CDK17Q00537 523 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 NME3Q13232 169 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 DUOXA1Q1HG43 343 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 PLEKHG6Q3KR16 790 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 CXorf57Q6NSI4 855 aaKnown RBP13.49□□□□□ -0.25
LIG1-212ENST00000596549 PSAPL1Q6NUJ1 521 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 XYLT1Q86Y38 959 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 CCAR2Q8N163 923 aaKnown RBP13.49□□□□□ -0.25
LIG1-212ENST00000596549 OR52K2Q8NGK3 314 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 OR2I1PQ8NGU4 316 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 SLC20A1Q8WUM9 679 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 IGSF8Q969P0 613 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 NPY6RQ99463 290 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 HSD3B7Q9H2F3 369 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 FANCLQ9NW38 375 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 NOCTQ9UK39 431 aaKnown RBP13.49□□□□□ -0.25
LIG1-212ENST00000596549 SLC6A14Q9UN76 642 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 PLA2G4CQ9UP65 541 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 SIK3Q9Y2K2 1263 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 CEP83Q9Y592 693 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 HS3ST4Q9Y661 456 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 SLCO1B1Q9Y6L6 691 aa13.49□□□□□ -0.25
LIG1-212ENST00000596549 SPTBN2O15020 2390 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 A0A1B0GVM2 712 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 TCAF2A6NFQ2 919 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 H0Y626 953 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 M0QYT0 321 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 SIN3BO75182 1162 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 ASLP04424 464 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 PMLP29590 882 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 ACSL1P33121 698 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 NOS2P35228 1153 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 FLT3P36888 993 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 MATKP42679 507 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 STK19P49842 368 aaPredicted RBP13.48□□□□□ -0.25
LIG1-212ENST00000596549 SULT1E1P49888 294 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 BPIFB4P59827 614 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 NCAPHQ15003 741 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 N4BP2L1Q5TBK1 243 aaPredicted RBP13.48□□□□□ -0.25
LIG1-212ENST00000596549 DAB2IPQ5VWQ8 1189 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 FBXL22Q6P050 247 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 APTXQ7Z2E3 356 aaKnown RBP13.48□□□□□ -0.25
LIG1-212ENST00000596549 FAM124AQ86V42 546 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 ZDHHC17Q8IUH5 632 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 RGL4Q8IZJ4 473 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 TMEM35BQ8NCS4 154 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 DNASE2BQ8WZ79 361 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 FOXJ1Q92949 421 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 STK33Q9BYT3 514 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 SYNCQ9H7C4 482 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 FAM207AQ9NSI2 230 aaPredicted RBP13.48□□□□□ -0.25
LIG1-212ENST00000596549 ERVW-1Q9UQF0 538 aa13.48□□□□□ -0.25
LIG1-212ENST00000596549 MEI4A8MW99 385 aa13.47□□□□□ -0.25
LIG1-212ENST00000596549 TTC34A8MYJ7 566 aa13.47□□□□□ -0.25
LIG1-212ENST00000596549 GFPT2O94808 682 aa13.47□□□□□ -0.25
LIG1-212ENST00000596549 ACADMP11310 421 aa13.47□□□□□ -0.25
LIG1-212ENST00000596549 ZNF18P17022 549 aa13.47□□□□□ -0.25
LIG1-212ENST00000596549 ABCB4P21439 1286 aa13.47□□□□□ -0.25
LIG1-212ENST00000596549 MZF1P28698 734 aaPredicted RBP13.47□□□□□ -0.25
LIG1-212ENST00000596549 SCNN1AP37088 669 aa13.47□□□□□ -0.25
LIG1-212ENST00000596549 NOVA1P51513 510 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms