RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PAGE5Q96GU1 130 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 TWNKQ96RR1 684 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 DPH1Q9BZG8 443 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 FAM117AQ9C073 453 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 VRTNQ9H8Y1 702 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 FBRSQ9HAH7 460 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 MARCH2Q9P0N8 246 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 GGA2Q9UJY4 613 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 HEMK1Q9Y5R4 338 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 BSNQ9UPA5 3926 aa14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 TLN1Q9Y490 2541 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-208ENST00000595726 NOTCH2Q04721 2471 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 A0A1W2PQ27 194 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 A0A1W2PQ64 194 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 LRRC72A6NJI9 287 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 OPA1O60313 960 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 SIN3BO75182 1162 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 DXOO77932 396 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 PABPC1P11940 636 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 SYKP43405 635 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 LSSP48449 732 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 SGSHP51688 502 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 ERVPABLB-1P60509 514 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 NUCB2P80303 420 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 CST6Q15828 149 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 MPPE1Q53F39 396 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 C6orf132Q5T0Z8 1188 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 CDCP2Q5VXM1 449 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 SPOPLQ6IQ16 392 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 CCDC186Q7Z3E2 898 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 TMC6Q7Z403 805 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 KIAA0907Q7Z7F0 614 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 TADA2BQ86TJ2 420 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 MMAAQ8IVH4 418 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 NELFCDQ8IXH7 590 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 FAM217AQ8IXS0 508 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 LSMEM2Q8N112 164 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 ZNF276Q8N554 614 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 XXYLT1Q8NBI6 393 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 WFIKKN2Q8TEU8 576 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 OMDQ99983 421 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 GOLPH3LQ9H4A5 285 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 ERVMER34-1Q9H9K5 563 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 POLR1BQ9H9Y6 1135 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 SLC39A2Q9NP94 309 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 CLIC5Q9NZA1 410 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 SUN2Q9UH99 717 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 USP25Q9UHP3 1055 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 SSUH2Q9Y2M2 353 aa14.32□□□□□ -0.12
SHKBP1-208ENST00000595726 A0A1W2PNU3 283 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-208ENST00000595726 C10orf142B7Z368 130 aa14.31□□□□□ -0.12
SHKBP1-208ENST00000595726 CSO75390 466 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-208ENST00000595726 CD70P32970 193 aa14.31□□□□□ -0.12
SHKBP1-208ENST00000595726 PSEN1P49768 467 aa14.31□□□□□ -0.12
SHKBP1-208ENST00000595726 DAB2P98082 770 aa14.31□□□□□ -0.12
SHKBP1-208ENST00000595726 TMA16Q96EY4 203 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-208ENST00000595726 MYO19Q96H55 970 aa14.31□□□□□ -0.12
SHKBP1-208ENST00000595726 UCKL1Q9NWZ5 548 aa14.31□□□□□ -0.12
SHKBP1-208ENST00000595726 USP3Q9Y6I4 520 aa14.31□□□□□ -0.12
SHKBP1-208ENST00000595726 SPTAN1Q13813 2472 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 A0A1B0GVM2 712 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 TERTO14746 1132 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 C4BPAP04003 597 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 MYL1P05976 194 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 ATP5BP06576 529 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 POLR2EP19388 210 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 SLC8A1P32418 973 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 CCR5P51681 352 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 PPP2CBP62714 309 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 PPP2CAP67775 309 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 ZNF211Q13398 564 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 KMT5BQ4FZB7 885 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 RSRC2Q7L4I2 434 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 AHI1Q8N157 1196 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 AADATQ8N5Z0 425 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 KIAA0895Q8NCT3 520 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 OR14C36Q8NHC7 312 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 NDRG1Q92597 394 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 EXOC1Q9NV70 894 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 DACH1Q9UI36 760 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 STRIP2Q9ULQ0 834 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 SCML1Q9UN30 329 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 CA5BQ9Y2D0 317 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 AHCTF1Q8WYP5 2266 aa14.3□□□□□ -0.12
SHKBP1-208ENST00000595726 TBC1D3DA0A087WVF3 549 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 TBC1D3IA0A087WXS9 549 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 TBC1D3EA0A087X179 549 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 TBC1D3KA0A087X1G2 549 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 PMS2P1A4D2B8 440 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 TBC1D3FA6NER0 549 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 LRRIQ3A6PVS8 624 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 TBC1D3LB9A6J9 549 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 FFAR2O15552 330 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 PRR29P0C7W0 189 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 TBC1D3HP0C7X1 549 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 MAT2AP31153 395 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 PDE4CQ08493 712 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 STK4Q13043 487 aa14.29□□□□□ -0.12
SHKBP1-208ENST00000595726 TRIP4Q15650 581 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms