RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 KIAA1522Q9P206 1035 aaPredicted RBP24.3■■□□□ 1.48
LSM4-204ENST00000594828 INTS6Q9UL03 887 aaKnown RBP24.3■■□□□ 1.48
LSM4-204ENST00000594828 GON4LQ3T8J9 2241 aa24.3■■□□□ 1.48
LSM4-204ENST00000594828 SPTBN2O15020 2390 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 SYNJ2BP-COX16A0A087WUM0 186 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 MEI4A8MW99 385 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 ARHGAP33O14559 1287 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 ASLP04424 464 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 CSRP1P21291 193 aaKnown RBP24.29■■□□□ 1.48
LSM4-204ENST00000594828 ABCB4P21439 1286 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 CCR1P32246 355 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 CSKP41240 450 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 ST8SIA6P61647 398 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 SLC6A3Q01959 620 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 FAM124AQ86V42 546 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 DNASE2BQ8WZ79 361 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 CNTNAP3BQ96NU0 1288 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 CNTNAP3Q9BZ76 1288 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 COX16Q9P0S2 106 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 NFE2L3Q9Y4A8 694 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 FHOD1Q9Y613 1164 aa24.29■■□□□ 1.48
LSM4-204ENST00000594828 METTL12A8MUP2 240 aa24.28■■□□□ 1.48
LSM4-204ENST00000594828 F5H5T6 163 aa24.28■■□□□ 1.48
LSM4-204ENST00000594828 GIPC1O14908 333 aa24.28■■□□□ 1.48
LSM4-204ENST00000594828 MOCS3O95396 460 aa24.28■■□□□ 1.48
LSM4-204ENST00000594828 SYPP08247 313 aa24.28■■□□□ 1.48
LSM4-204ENST00000594828 PLEKHG6Q3KR16 790 aa24.28■■□□□ 1.48
LSM4-204ENST00000594828 PTPN20Q4JDL3 420 aa24.28■■□□□ 1.48
LSM4-204ENST00000594828 OLFML1Q6UWY5 402 aa24.28■■□□□ 1.48
LSM4-204ENST00000594828 MMS22LQ6ZRQ5 1243 aa24.28■■□□□ 1.48
LSM4-204ENST00000594828 ENOX1Q8TC92 643 aaKnown RBP24.28■■□□□ 1.48
LSM4-204ENST00000594828 C7P10643 843 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 CEACAM1P13688 526 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 CYP11B1P15538 503 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 PI4KAP42356 2102 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 RPS14P62263 151 aaKnown RBP24.27■■□□□ 1.48
LSM4-204ENST00000594828 ZBTB16Q05516 673 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 PITRM1Q5JRX3 1037 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 DCAF12L1Q5VU92 463 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 SLC26A9Q7LBE3 791 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 ZDHHC17Q8IUH5 632 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 HDDC3Q8N4P3 179 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 TMEM35BQ8NCS4 154 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 MYO19Q96H55 970 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 GBP4Q96PP9 640 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 PRMT1Q99873 361 aaKnown RBP24.27■■□□□ 1.48
LSM4-204ENST00000594828 NAA15Q9BXJ9 866 aaKnown RBP24.27■■□□□ 1.48
LSM4-204ENST00000594828 TAB2Q9NYJ8 693 aa24.27■■□□□ 1.48
LSM4-204ENST00000594828 MUC22E2RYF6 1773 aaPredicted RBP24.26■■□□□ 1.47
LSM4-204ENST00000594828 DNTTP04053 509 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 UCHL3P15374 230 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 PMLP29590 882 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 NOS2P35228 1153 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 NME3Q13232 169 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 MINDY1Q8N5J2 469 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 KDM1BQ8NB78 822 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 ZNF397Q8NF99 534 aaPredicted RBP24.26■■□□□ 1.47
LSM4-204ENST00000594828 GPT2Q8TD30 523 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 MRGPRX3Q96LB0 322 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 MIR1-1HGQ9H1L0 117 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 MTG2Q9H4K7 406 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 ERVW-1Q9UQF0 538 aa24.26■■□□□ 1.47
LSM4-204ENST00000594828 A0A1B0GTW7 788 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 OPHN1O60890 802 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 DAB1O75553 588 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 SRPRAP08240 638 aaKnown RBP24.25■■□□□ 1.47
LSM4-204ENST00000594828 CDH5P33151 784 aaPredicted RBP24.25■■□□□ 1.47
LSM4-204ENST00000594828 MTA1Q13330 715 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 HNRNPA1L2Q32P51 320 aaKnown RBP24.25■■□□□ 1.47
LSM4-204ENST00000594828 RABGAP1LQ5R372 815 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 DEFB124Q8NES8 71 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 STK33Q9BYT3 514 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 PCED1AQ9H1Q7 454 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 VPS16Q9H269 839 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 SLC32A1Q9H598 525 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 ANGPTL2Q9UKU9 493 aa24.25■■□□□ 1.47
LSM4-204ENST00000594828 ADAMTS9Q9P2N4 1935 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 M0QYT0 321 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 ACSL1P33121 698 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 MATKP42679 507 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 CTSOP43234 321 aaPredicted RBP24.24■■□□□ 1.47
LSM4-204ENST00000594828 RNASE9P60153 205 aaKnown RBP24.24■■□□□ 1.47
LSM4-204ENST00000594828 ECT2LQ008S8 904 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 SEMA3BQ13214 749 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 SLC12A1Q13621 1099 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 TTC39BQ5VTQ0 682 aaPredicted RBP24.24■■□□□ 1.47
LSM4-204ENST00000594828 TAF3Q5VWG9 929 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 ZNF776Q68DI1 518 aaPredicted RBP24.24■■□□□ 1.47
LSM4-204ENST00000594828 RBM43Q6ZSC3 357 aaKnown RBP24.24■■□□□ 1.47
LSM4-204ENST00000594828 APCDD1Q8J025 514 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 CCAR2Q8N163 923 aaKnown RBP24.24■■□□□ 1.47
LSM4-204ENST00000594828 C18orf8Q96DM3 657 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 RSPH9Q9H1X1 276 aaPredicted RBP24.24■■□□□ 1.47
LSM4-204ENST00000594828 RRN3Q9NYV6 651 aa24.24■■□□□ 1.47
LSM4-204ENST00000594828 EIF2B4Q9UI10 523 aaKnown RBP24.24■■□□□ 1.47
LSM4-204ENST00000594828 RNASEH1O60930 286 aaKnown RBP24.23■■□□□ 1.47
LSM4-204ENST00000594828 SIN3BO75182 1162 aa24.23■■□□□ 1.47
LSM4-204ENST00000594828 ZNF252P-AS1Q0IIN9 211 aa24.23■■□□□ 1.47
LSM4-204ENST00000594828 ARID5BQ14865 1188 aa24.23■■□□□ 1.47
LSM4-204ENST00000594828 TTC31Q49AM3 519 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms