RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 PRICKLE1Q96MT3 831 aaPredicted RBP17.94■□□□□ 0.46
IRF3-208ENST00000594387 RPRD1AQ96P16 312 aaPredicted RBP17.94■□□□□ 0.46
IRF3-208ENST00000594387 NPY6RQ99463 290 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 SIK2Q9H0K1 926 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 FBRSQ9HAH7 460 aa17.94■□□□□ 0.46
IRF3-208ENST00000594387 XPO7Q9UIA9 1087 aaKnown RBP17.94■□□□□ 0.46
IRF3-208ENST00000594387 NOCTQ9UK39 431 aaKnown RBP17.94■□□□□ 0.46
IRF3-208ENST00000594387 SYCE3A1L190 88 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 KHNYNO15037 678 aaKnown RBP17.93■□□□□ 0.46
IRF3-208ENST00000594387 EPHB6O15197 1021 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 FERP16591 822 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 OXTRP30559 389 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 LMAN2Q12907 356 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 SLC25A52Q3SY17 297 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 LYSMD4Q5XG99 296 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 DGLUCYQ7Z3D6 616 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 METTL3Q86U44 580 aaKnown RBP17.93■□□□□ 0.46
IRF3-208ENST00000594387 DHX40Q8IX18 779 aaKnown RBP17.93■□□□□ 0.46
IRF3-208ENST00000594387 RTKNQ9BST9 563 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 TKTL2Q9H0I9 626 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 DOCK4Q8N1I0 1966 aa17.93■□□□□ 0.46
IRF3-208ENST00000594387 GVINP1Q7Z2Y8 2422 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 A0A1B0GVM2 712 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 FAM170AA1A519 330 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 ANKRD62A6NC57 917 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 TCAF2A6NFQ2 919 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 GOLGA6L19H0YKK7 550 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 PAGE1O75459 146 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 CYP1A1P04798 512 aaPredicted RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 CALB1P05937 261 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 HLA-EP13747 358 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 DESP17661 470 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 PRKCHP24723 683 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 FMO1Q01740 532 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 SULT2A1Q06520 285 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 SFSWAPQ12872 951 aaKnown RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 ZNF177Q13360 481 aaPredicted RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 EIF4EBP2Q13542 120 aaPredicted RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 SF3A2Q15428 464 aaKnown RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 PITRM1Q5JRX3 1037 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 PLA2G2CQ5R387 149 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 SYCP2LQ5T4T6 812 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 IL31Q6EBC2 164 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 MMS22LQ6ZRQ5 1243 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 ARMCX6Q7L4S7 300 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 ERMP1Q7Z2K6 904 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 RABEPKQ7Z6M1 372 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 CCAR2Q8N163 923 aaKnown RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 FRMD1Q8N878 549 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 OR2T3Q8NH03 318 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 WFDC5Q8TCV5 224 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 TTC17Q96AE7 1141 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 PGAP3Q96FM1 320 aaPredicted RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 C11orf70Q9BRQ4 267 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 HSD3B7Q9H2F3 369 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 RTN4Q9NQC3 1192 aaKnown RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 ADAM22Q9P0K1 906 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 MBD1Q9UIS9 605 aaPredicted RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 VANGL2Q9ULK5 521 aa17.92■□□□□ 0.46
IRF3-208ENST00000594387 NYNRINQ9P2P1 1898 aaKnown RBP17.92■□□□□ 0.46
IRF3-208ENST00000594387 IGHV1OR15-9A0A0B4J2B8 117 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 RNASEH1O60930 286 aaKnown RBP17.91■□□□□ 0.46
IRF3-208ENST00000594387 SRPRAP08240 638 aaKnown RBP17.91■□□□□ 0.46
IRF3-208ENST00000594387 TNFAIP3P21580 790 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 MMP8P22894 467 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 CD6P30203 668 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 SDC4P31431 198 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 CSKP41240 450 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 CXCR3P49682 368 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 FOXK2Q01167 660 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 AUHQ13825 339 aaKnown RBP17.91■□□□□ 0.46
IRF3-208ENST00000594387 ARL13BQ3SXY8 428 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 C2CD6Q53TS8 623 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 RNF43Q68DV7 783 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 PPP1R2P3Q6NXS1 205 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 FBXL22Q6P050 247 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 ARCQ7LC44 396 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 SYT12Q8IV01 421 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 SLC30A5Q8TAD4 765 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 FOXJ1Q92949 421 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 AGPAT1Q99943 283 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 SELENOOQ9BVL4 669 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 NUSAP1Q9BXS6 441 aaKnown RBP17.91■□□□□ 0.46
IRF3-208ENST00000594387 SLC6A17Q9H1V8 727 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 TMEM245Q9H330 911 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 ITM2CQ9NQX7 267 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 METTL5Q9NRN9 209 aaKnown RBP17.91■□□□□ 0.46
IRF3-208ENST00000594387 PIGVQ9NUD9 493 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 MYO6Q9UM54 1294 aa17.91■□□□□ 0.46
IRF3-208ENST00000594387 GPR179Q6PRD1 2367 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 ADAMTS9Q9P2N4 1935 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 MUC22E2RYF6 1773 aaPredicted RBP17.9■□□□□ 0.46
IRF3-208ENST00000594387 CLDN11O75508 207 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 DNTTP04053 509 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 CHRNB2P17787 502 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 RDXP35241 583 aaKnown RBP17.9■□□□□ 0.46
IRF3-208ENST00000594387 ECT2LQ008S8 904 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 ZNF33AQ06730 810 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 CAMK2GQ13555 558 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms