RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GPD1P21695 349 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 SLC6A4P31645 630 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 RDXP35241 583 aaKnown RBP20.29■□□□□ 0.84
LSM4-203ENST00000593829 NUBP1P53384 320 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 ATP11AP98196 1134 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 MAPK8IP2Q13387 824 aaPredicted RBP20.29■□□□□ 0.84
LSM4-203ENST00000593829 MAMLD1Q13495 774 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 CCDC14Q49A88 953 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 BRMS1LQ5PSV4 323 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 PPP1R15BQ5SWA1 713 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 PLEKHA7Q6IQ23 1121 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 RFWD3Q6PCD5 774 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 DTWD2Q8NBA8 298 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 ZNF653Q96CK0 615 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 P2RY11Q96G91 374 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 MCEEQ96PE7 176 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 DEF6Q9H4E7 631 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 CNOT8Q9UFF9 292 aaKnown RBP20.29■□□□□ 0.84
LSM4-203ENST00000593829 LCMT1Q9UIC8 334 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 MIA3Q5JRA6 1907 aa20.29■□□□□ 0.84
LSM4-203ENST00000593829 ENDOD1O94919 500 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 KAT7O95251 611 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 APODP05090 189 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 GRIA2P42262 883 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 KRT83P78385 493 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 FBXO43Q4G163 708 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 CCDC122Q5T0U0 273 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 PIK3R6Q5UE93 754 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 ALKBH5Q6P6C2 394 aaKnown RBP20.28■□□□□ 0.84
LSM4-203ENST00000593829 RUBCNQ92622 972 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 CHRDQ9H2X0 955 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 KMT2EQ8IZD2 1858 aa20.28■□□□□ 0.84
LSM4-203ENST00000593829 ATMINO43313 823 aaPredicted RBP20.27■□□□□ 0.84
LSM4-203ENST00000593829 RPL7AP62424 266 aaKnown RBP20.27■□□□□ 0.84
LSM4-203ENST00000593829 KDSRQ06136 332 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 C15orf59Q2T9L4 293 aaPredicted RBP20.27■□□□□ 0.84
LSM4-203ENST00000593829 GRAMD4Q6IC98 578 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 NUDT18Q6ZVK8 323 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 CHSY1Q86X52 802 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 PHTF2Q8N3S3 785 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 TKTL2Q9H0I9 626 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 ARHGEF38Q9NXL2 777 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 FBXO10Q9UK96 956 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 A0A0A0MRY4 1105 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 DGKGP49619 791 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 ATXN1P54253 815 aaKnown RBP20.27■□□□□ 0.84
LSM4-203ENST00000593829 GFPT1Q06210 699 aaPredicted RBP20.27■□□□□ 0.84
LSM4-203ENST00000593829 MESP2Q0VG99 397 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 SLC18A3Q16572 532 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 CDO1Q16878 200 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 ASTE1Q2TB18 679 aaPredicted RBP20.27■□□□□ 0.84
LSM4-203ENST00000593829 MS4A13Q5J8X5 152 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 MPP7Q5T2T1 576 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 RAP1GAP2Q684P5 730 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 STRADAQ7RTN6 431 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 HJURPQ8NCD3 748 aaPredicted RBP20.27■□□□□ 0.84
LSM4-203ENST00000593829 CCDC26Q8TAB7 109 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 EZH1Q92800 747 aaPredicted RBP20.27■□□□□ 0.84
LSM4-203ENST00000593829 CHP1Q99653 195 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 IER2Q9BTL4 223 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 SAR1BQ9Y6B6 198 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 SCINQ9Y6U3 715 aa20.27■□□□□ 0.84
LSM4-203ENST00000593829 TYW5A2RUC4 315 aaKnown RBP20.26■□□□□ 0.83
LSM4-203ENST00000593829 AKR1B10O60218 316 aa20.26■□□□□ 0.83
LSM4-203ENST00000593829 PAGE1O75459 146 aa20.26■□□□□ 0.83
LSM4-203ENST00000593829 TACR2P21452 398 aa20.26■□□□□ 0.83
LSM4-203ENST00000593829 HOXD9P28356 352 aaPredicted RBP20.26■□□□□ 0.83
LSM4-203ENST00000593829 SGSHP51688 502 aa20.26■□□□□ 0.83
LSM4-203ENST00000593829 ZNF143P52747 638 aaPredicted RBP20.26■□□□□ 0.83
LSM4-203ENST00000593829 CENPIQ92674 756 aaPredicted RBP20.26■□□□□ 0.83
LSM4-203ENST00000593829 CCDC42Q96M95 316 aa20.26■□□□□ 0.83
LSM4-203ENST00000593829 SLC2A11Q9BYW1 496 aa20.26■□□□□ 0.83
LSM4-203ENST00000593829 NHEJ1Q9H9Q4 299 aaPredicted RBP20.26■□□□□ 0.83
LSM4-203ENST00000593829 MRPL47Q9HD33 250 aaKnown RBP20.26■□□□□ 0.83
LSM4-203ENST00000593829 TBC1D3BA6NDS4 549 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 F5H5T6 163 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 K7EQS6 105 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 TRIM24O15164 1050 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 TBL1XO60907 577 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 SYF2O95926 243 aaKnown RBP20.25■□□□□ 0.83
LSM4-203ENST00000593829 CISD3P0C7P0 127 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 SH3PXD2AQ5TCZ1 1133 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 LRRC31Q6UY01 552 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 FAM131BQ86XD5 332 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 LGI2Q8N0V4 545 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 GOLGA6L1Q8N7Z2 621 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 TERB1Q8NA31 727 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 FAM172AQ8WUF8 416 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 PRICKLE1Q96MT3 831 aaPredicted RBP20.25■□□□□ 0.83
LSM4-203ENST00000593829 PRRX2Q99811 253 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 PRMT1Q99873 361 aaKnown RBP20.25■□□□□ 0.83
LSM4-203ENST00000593829 CNPY3Q9BT09 278 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 SPATA6Q9NWH7 488 aaPredicted RBP20.25■□□□□ 0.83
LSM4-203ENST00000593829 HPCAL4Q9UM19 191 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 NENFQ9UMX5 172 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 RNF40O75150 1001 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 DESP17661 470 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 TNFRSF4P43489 277 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 MTAPQ13126 283 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 Q6ZS52 159 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms