RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SLC39A13Q96H72 371 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 ZNF419Q96HQ0 510 aaPredicted RBP13.71□□□□□ -0.21
H3F3B-213ENST00000593254 LRIG1Q96JA1 1093 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 FCRL2Q96LA5 508 aaPredicted RBP13.71□□□□□ -0.21
H3F3B-213ENST00000593254 TRIM62Q9BVG3 475 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 CIPCQ9C0C6 399 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 SLC6A17Q9H1V8 727 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 SIX2Q9NPC8 291 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 KIAA1522Q9P206 1035 aaPredicted RBP13.71□□□□□ -0.21
H3F3B-213ENST00000593254 DACH1Q9UI36 760 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 NAALADL1Q9UQQ1 740 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 TLR6Q9Y2C9 796 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 PCDHB9Q9Y5E1 797 aa13.71□□□□□ -0.21
H3F3B-213ENST00000593254 MGAQ8IWI9 3026 aa13.71□□□□□ -0.22
H3F3B-213ENST00000593254 PTPRQQ9UMZ3 2332 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 SLC6A4P31645 630 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 USP8P40818 1118 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 MIIPQ5JXC2 388 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 SYPL2Q5VXT5 272 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 NADSYN1Q6IA69 706 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 METTL3Q86U44 580 aaKnown RBP13.7□□□□□ -0.22
H3F3B-213ENST00000593254 TAC4Q86UU9 113 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 WFDC5Q8TCV5 224 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 SORCS1Q8WY21 1168 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 HSPA12BQ96MM6 686 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 MKRN2Q9H000 416 aaKnown RBP13.7□□□□□ -0.22
H3F3B-213ENST00000593254 NDST4Q9H3R1 872 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 POPDC2Q9HBU9 364 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 CD93Q9NPY3 652 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 LMBRD1Q9NUN5 540 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 ABCB8Q9NUT2 735 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 AJAP1Q9UKB5 411 aaPredicted RBP13.7□□□□□ -0.22
H3F3B-213ENST00000593254 PCDHGC3Q9UN70 934 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 CYP8B1Q9UNU6 501 aa13.7□□□□□ -0.22
H3F3B-213ENST00000593254 APOBEC2Q9Y235 224 aaKnown RBP13.7□□□□□ -0.22
H3F3B-213ENST00000593254 GOLGA6L7A0A1B0GV03 622 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 EIF4E1BA6NMX2 242 aaKnown RBP13.69□□□□□ -0.22
H3F3B-213ENST00000593254 DKK1O94907 266 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 IGLV3-25P01717 112 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 PABPC1P11940 636 aaKnown RBP13.69□□□□□ -0.22
H3F3B-213ENST00000593254 PRKCHP24723 683 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 YWHAZP63104 245 aaKnown RBP13.69□□□□□ -0.22
H3F3B-213ENST00000593254 PLEKHG6Q3KR16 790 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 DPY19L2P1Q6NXN4 242 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 KIAA1324Q6UXG2 1013 aaKnown RBP13.69□□□□□ -0.22
H3F3B-213ENST00000593254 SERPINA13PQ6UXR4 307 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 TMPRSS7Q7RTY8 843 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 ADIPOR2Q86V24 386 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 AHI1Q8N157 1196 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 WDTC1Q8N5D0 677 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
H3F3B-213ENST00000593254 CPXM1Q96SM3 734 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 TUBGCP2Q9BSJ2 902 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 PRDM16Q9HAZ2 1276 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 USP36Q9P275 1121 aaKnown RBP13.69□□□□□ -0.22
H3F3B-213ENST00000593254 TJP2Q9UDY2 1190 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 GGA2Q9UJY4 613 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 DNAJC12Q9UKB3 198 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 PCOLCE2Q9UKZ9 415 aa13.69□□□□□ -0.22
H3F3B-213ENST00000593254 A0A087WV48 116 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 FOXN3O00409 490 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-213ENST00000593254 CAPN9O14815 690 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 SYNCRIPO60506 623 aaKnown RBP13.68□□□□□ -0.22
H3F3B-213ENST00000593254 TBL1XO60907 577 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 EPHX1P07099 455 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-213ENST00000593254 CLCN1P35523 988 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 COPAP53621 1224 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 ARID5AQ03989 594 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 PTK2Q05397 1052 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 GRIK2Q13002 908 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 EIF4EBP2Q13542 120 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-213ENST00000593254 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 HSP90AA4PQ58FG1 418 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 CT47A1Q5JQC4 288 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-213ENST00000593254 CHST9Q7L1S5 443 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 TMPRSS6Q8IU80 811 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 ZNF557Q8N988 423 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-213ENST00000593254 HJURPQ8NCD3 748 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-213ENST00000593254 BAHD1Q8TBE0 780 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-213ENST00000593254 MYEOVQ96EZ4 313 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 DDX50Q9BQ39 737 aaKnown RBP13.68□□□□□ -0.22
H3F3B-213ENST00000593254 ZDHHC5Q9C0B5 715 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 NUCKS1Q9H1E3 243 aaKnown RBP13.68□□□□□ -0.22
H3F3B-213ENST00000593254 LHX5Q9H2C1 402 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 TMEM245Q9H330 911 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 TOR4AQ9NXH8 423 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 SUSD2Q9UGT4 822 aa13.68□□□□□ -0.22
H3F3B-213ENST00000593254 NYNRINQ9P2P1 1898 aaKnown RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 TRUB2O95900 331 aaKnown RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 MOCS2O96007 188 aaPredicted RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 IGLV3-19P01714 112 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 GLI1P08151 1106 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 DLDP09622 509 aaKnown RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 PNMA6AP0CW24 399 aaPredicted RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 C7P10643 843 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 HLA-EP13747 358 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 CD6P30203 668 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 CD70P32970 193 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 RPS24P62847 133 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms