RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PFKLP17858 780 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 ADRA1BP35368 520 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 MLLT6P55198 1093 aaPredicted RBP9.97□□□□□ -0.81
DDX39A-220ENST00000593008 RPS24P62847 133 aaKnown RBP9.97□□□□□ -0.81
DDX39A-220ENST00000593008 CSTF1Q05048 431 aaKnown RBP9.97□□□□□ -0.81
DDX39A-220ENST00000593008 MESP2Q0VG99 397 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 PIGHQ14442 188 aaPredicted RBP9.97□□□□□ -0.81
DDX39A-220ENST00000593008 PPP2R5DQ14738 602 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 MS4A13Q5J8X5 152 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 TADA2BQ86TJ2 420 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 CHSY1Q86X52 802 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 ZNF683Q8IZ20 524 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 CPA6Q8N4T0 437 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 ZNF276Q8N554 614 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 CCDC33Q8N5R6 958 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 MSANTD3Q96H12 275 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 C16orf45Q96MC5 204 aaPredicted RBP9.97□□□□□ -0.81
DDX39A-220ENST00000593008 CDK5RAP1Q96SZ6 601 aaKnown RBP9.97□□□□□ -0.81
DDX39A-220ENST00000593008 PRMT1Q99873 361 aaKnown RBP9.97□□□□□ -0.81
DDX39A-220ENST00000593008 TRIM62Q9BVG3 475 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 DHX35Q9H5Z1 703 aaKnown RBP9.97□□□□□ -0.81
DDX39A-220ENST00000593008 WDCPQ9H6R7 721 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 FBRSL1Q9HCM7 1045 aaKnown RBP9.97□□□□□ -0.81
DDX39A-220ENST00000593008 TMEM51Q9NW97 253 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 PLK2Q9NYY3 685 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 VANGL2Q9ULK5 521 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 SH3BP1Q9Y3L3 701 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 R4GN57 208 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 ZFHX2Q9C0A1 2572 aaPredicted RBP9.97□□□□□ -0.81
DDX39A-220ENST00000593008 C3orf70A6NLC5 250 aaPredicted RBP9.96□□□□□ -0.82
DDX39A-220ENST00000593008 GFRA2O00451 464 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 PRPSAP2O60256 369 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 ACSL4O60488 711 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 EGFP01133 1207 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 CYP17A1P05093 508 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 SP9P0CG40 484 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 TCF3P15923 654 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 GOT1P17174 413 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 TACR2P21452 398 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 CCR1P32246 355 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 GBP1P32455 592 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 GJA4P35212 333 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 PCK1P35558 622 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 RPS9P46781 194 aaKnown RBP9.96□□□□□ -0.82
DDX39A-220ENST00000593008 GALK1P51570 392 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 ARSEP51690 589 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 GNG11P61952 73 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 RING1Q06587 406 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 ADCY2Q08462 1091 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 SCAPQ12770 1279 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 GRSF1Q12849 480 aaKnown RBP eCLIP9.96□□□□□ -0.82
DDX39A-220ENST00000593008 NNTQ13423 1086 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 AUHQ13825 339 aaKnown RBP9.96□□□□□ -0.82
DDX39A-220ENST00000593008 LRRC32Q14392 662 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 GAS6Q14393 721 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 GAB4Q2WGN9 574 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 ALFQ53S48 1182 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 HS1BP3Q53T59 392 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 PPP6R3Q5H9R7 873 aaPredicted RBP9.96□□□□□ -0.82
DDX39A-220ENST00000593008 FSTL4Q6MZW2 842 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 FBXL22Q6P050 247 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 TPGS1Q6ZTW0 290 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 PEX26Q7Z412 305 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 C12orf40Q86WS4 652 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 TMEM25Q86YD3 366 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 SFTPA1Q8IWL2 248 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 TP53INP2Q8IXH6 220 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 LGI2Q8N0V4 545 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 WFDC5Q8TCV5 224 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 LRRN4Q8WUT4 740 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 NTAN1Q96AB6 310 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.82
DDX39A-220ENST00000593008 P2RY13Q9BPV8 354 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 TLR10Q9BXR5 811 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 IRF2BPLQ9H1B7 796 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 CHRDQ9H2X0 955 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 PCDH18Q9HCL0 1135 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 KCND1Q9NSA2 647 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 NDFIP2Q9NV92 336 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 ETNK2Q9NVF9 386 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 C2orf42Q9NWW7 574 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 RRN3Q9NYV6 651 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 MPP6Q9NZW5 540 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 DMDP11532 3685 aa9.96□□□□□ -0.82
DDX39A-220ENST00000593008 TCRBV7S2A1N4TA0A589 114 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 LRRD1A4D1F6 860 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 CREB3O43889 395 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 SRGAP2O75044 1071 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 RNF8O76064 485 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 LRIG2O94898 1065 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 MAP3K6O95382 1288 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 NFATC1O95644 943 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 KRT10P13645 584 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 CTNNA2P26232 953 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 HOXC13P31276 330 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 L1CAMP32004 1257 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 CXCR5P32302 372 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 CTNNA1P35221 906 aaKnown RBP9.95□□□□□ -0.82
DDX39A-220ENST00000593008 MAGEA9P43362 315 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 HARS2P49590 506 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms