RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 CASTOR2A6NHX0 329 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 KCNK1O00180 336 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 GLRA3O75311 464 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 F9P00740 461 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 EPHB2P29323 1055 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 SCNN1GP51170 649 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 AFF1P51825 1210 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 ZNF135P52742 658 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 OCRLQ01968 901 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 PPIDQ08752 370 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 KRT72Q14CN4 511 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 INTS6LQ5JSJ4 861 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 GNASQ5JWF2 1037 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 SPANXN3Q5MJ09 141 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 CRLF3Q8IUI8 442 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 TP53INP2Q8IXH6 220 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 ATP2A3Q93084 1043 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 SENP6Q9GZR1 1112 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 TLE6Q9H808 572 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 FBXO6Q9NRD1 293 aaPredicted RBP17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 SLC17A6Q9P2U8 582 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 TRPM7Q96QT4 1865 aa17.01■□□□□ 0.31
PRKCSH-217ENST00000592741 MTSS1O43312 755 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 CCDC22O60826 627 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 ODC1P11926 461 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 MX2P20592 715 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 ZNF157P51786 506 aaPredicted RBP17■□□□□ 0.31
PRKCSH-217ENST00000592741 CACNA2D1P54289 1103 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 CDK18Q07002 472 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 CST9Q5W186 159 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 GDF6Q6KF10 455 aaPredicted RBP17■□□□□ 0.31
PRKCSH-217ENST00000592741 FAM13CQ8NE31 585 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 PTCD3Q96EY7 689 aaKnown RBP17■□□□□ 0.31
PRKCSH-217ENST00000592741 EPAS1Q99814 870 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 ANLNQ9NQW6 1124 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 ARL8BQ9NVJ2 186 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 ZFATQ9P243 1243 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 TXNDC16Q9P2K2 825 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 MCM8Q9UJA3 840 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 HHLA1C9JL84 531 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 TPP1O14773 563 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 IBSPP21815 317 aaPredicted RBP17■□□□□ 0.31
PRKCSH-217ENST00000592741 GARSP41250 739 aaKnown RBP17■□□□□ 0.31
PRKCSH-217ENST00000592741 IRGQQ8WZA9 623 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 MYLPFQ96A32 169 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 COLEC11Q9BWP8 271 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 RRAGCQ9HB90 399 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 TMEM30AQ9NV96 361 aa17■□□□□ 0.31
PRKCSH-217ENST00000592741 RPL26L1Q9UNX3 145 aaKnown RBP17■□□□□ 0.31
PRKCSH-217ENST00000592741 MYO18AQ92614 2054 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 FCHO1O14526 889 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 GPR182O15218 404 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 SNNO75324 88 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 ANP32DO95626 131 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 AP2A1O95782 977 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 CHRNA1P02708 482 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 ALDOAP04075 364 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 CALB2P22676 271 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 SERPINB6P35237 376 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 STX3Q13277 289 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 FAM91A1Q658Y4 838 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 CXCL17Q6UXB2 119 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 AGMOQ6ZNB7 445 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 METTL23Q86XA0 190 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 ARID3BQ8IVW6 561 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 OR52K1Q8NGK4 314 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 PPP1R14CQ8TAE6 165 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 HDAC11Q96DB2 347 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 CERS2Q96G23 380 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 WWP1Q9H0M0 922 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 WDCPQ9H6R7 721 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 LRRC40Q9H9A6 602 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 RPS6KL1Q9Y6S9 549 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 C2orf71A6NGG8 1288 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 I6L893 689 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 ITGA2BP08514 1039 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 PDE1BQ01064 536 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 UPP1Q16831 310 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 TIGD5Q53EQ6 642 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 WASHC2DQ5SRD0 308 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 N4BP2L1Q5TBK1 243 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 ITPRIPL1Q6GPH6 555 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 BHLHA9Q7RTU4 235 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 CTU1Q7Z7A3 348 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 MRPL10Q7Z7H8 261 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 NPWQ8N729 165 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 TRPV1Q8NER1 839 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 EDEM1Q92611 657 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 AGAP3Q96P47 875 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 CPNE1Q99829 537 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 BTBD10Q9BSF8 475 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 GBA3Q9H227 469 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 CSNK1G1Q9HCP0 422 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 BFARQ9NZS9 450 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 DCDC2Q9UHG0 476 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 TRHDEQ9UKU6 1024 aa16.99■□□□□ 0.31
PRKCSH-217ENST00000592741 ERI2A8K979 691 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-217ENST00000592741 TOP3BO95985 862 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms