RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 WSB2Q9NYS7 404 aaPredicted RBP14.36□□□□□ -0.11
APOC1-208ENST00000592535 SLC12A6Q9UHW9 1150 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 NUMA1Q14980 2115 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 SPTBN2O15020 2390 aa14.36□□□□□ -0.11
APOC1-208ENST00000592535 PCDH15Q96QU1 1955 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 H0Y626 953 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 M0QYT0 321 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 GFPT2O94808 682 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 MMEP08473 750 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 SLC2A3P11169 496 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 ABCB4P21439 1286 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 KCNA4P22459 653 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 CCR1P32246 355 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 NOS2P35228 1153 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 CSKP41240 450 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 DPP6P42658 865 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 GABRB2P47870 512 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 POLR2FP61218 127 aaKnown RBP14.35□□□□□ -0.11
APOC1-208ENST00000592535 C2CD6Q53TS8 623 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 PITRM1Q5JRX3 1037 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 ERICH1Q86X53 443 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 CIR1Q86X95 450 aaPredicted RBP14.35□□□□□ -0.11
APOC1-208ENST00000592535 ZDHHC17Q8IUH5 632 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 CCDC117Q8IWD4 279 aaPredicted RBP14.35□□□□□ -0.11
APOC1-208ENST00000592535 EPS8L1Q8TE68 723 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 SLC20A1Q8WUM9 679 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 TTC17Q96AE7 1141 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 C18orf8Q96DM3 657 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 TOE1Q96GM8 510 aaKnown RBP14.35□□□□□ -0.11
APOC1-208ENST00000592535 MYO19Q96H55 970 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 ZNF419Q96HQ0 510 aaPredicted RBP14.35□□□□□ -0.11
APOC1-208ENST00000592535 ADAM33Q9BZ11 813 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 MTG2Q9H4K7 406 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 NLRC4Q9NPP4 1024 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 PRSS16Q9NQE7 514 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 TMEM63CQ9P1W3 806 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 LIMA1Q9UHB6 759 aaKnown RBP14.35□□□□□ -0.11
APOC1-208ENST00000592535 SIK3Q9Y2K2 1263 aa14.35□□□□□ -0.11
APOC1-208ENST00000592535 CDX4O14627 284 aaPredicted RBP14.34□□□□□ -0.11
APOC1-208ENST00000592535 LSM8O95777 96 aaKnown RBP14.34□□□□□ -0.11
APOC1-208ENST00000592535 IGLV3-19P01714 112 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 ASLP04424 464 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 CFIP05156 583 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 ACADMP11310 421 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 TFE3P19532 575 aaPredicted RBP14.34□□□□□ -0.11
APOC1-208ENST00000592535 HOXD12P35452 270 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 GGCXP38435 758 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 MATKP42679 507 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 CTSOP43234 321 aaPredicted RBP14.34□□□□□ -0.11
APOC1-208ENST00000592535 IRAK1P51617 712 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 JAM2P57087 298 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 RNASE9P60153 205 aaKnown RBP14.34□□□□□ -0.11
APOC1-208ENST00000592535 NOMO3P69849 1222 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 NCAPHQ15003 741 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 DUOXA1Q1HG43 343 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 FAM102AQ5T9C2 384 aaPredicted RBP14.34□□□□□ -0.11
APOC1-208ENST00000592535 NAA35Q5VZE5 725 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 FBXL22Q6P050 247 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 SLC23A3Q6PIS1 610 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 XYLT1Q86Y38 959 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 APCDD1Q8J025 514 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 MRGPRX3Q96LB0 322 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 NPY6RQ99463 290 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 GPR174Q9BXC1 333 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 NUSAP1Q9BXS6 441 aaKnown RBP14.34□□□□□ -0.11
APOC1-208ENST00000592535 TMEM9BQ9NQ34 198 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 FSCN3Q9NQT6 498 aa14.34□□□□□ -0.11
APOC1-208ENST00000592535 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.34□□□□□ -0.11
APOC1-208ENST00000592535 KIAA1522Q9P206 1035 aaPredicted RBP14.34□□□□□ -0.11
APOC1-208ENST00000592535 NOCTQ9UK39 431 aaKnown RBP14.34□□□□□ -0.11
APOC1-208ENST00000592535 ASCC3Q8N3C0 2202 aaKnown RBP14.33□□□□□ -0.12
APOC1-208ENST00000592535 LGALS16A8MUM7 142 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 GOLGA8SH3BPF8 625 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 ZNF18P17022 549 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 ENGP17813 658 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 MAOBP27338 520 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 OXTRP30559 389 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 SOX5P35711 763 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 SCNN1AP37088 669 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 NUMBP49757 651 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 SULT1E1P49888 294 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 ST8SIA6P61647 398 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 RPS14P62263 151 aaKnown RBP14.33□□□□□ -0.12
APOC1-208ENST00000592535 CENPCQ03188 943 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 TYRO3Q06418 890 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 AUHQ13825 339 aaKnown RBP14.33□□□□□ -0.12
APOC1-208ENST00000592535 SYCP1Q15431 976 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 PLEKHG6Q3KR16 790 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 FAM124AQ86V42 546 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 RGL4Q8IZJ4 473 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 CCAR2Q8N163 923 aaKnown RBP14.33□□□□□ -0.12
APOC1-208ENST00000592535 ANKRD20A12PQ8NF67 263 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 CPA5Q8WXQ8 436 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 FOXJ1Q92949 421 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 IGSF8Q969P0 613 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 PCMTD1Q96MG8 357 aaPredicted RBP14.33□□□□□ -0.12
APOC1-208ENST00000592535 TBCBQ99426 244 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 HSD3B7Q9H2F3 369 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 ANLNQ9NQW6 1124 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 PIGVQ9NUD9 493 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms