RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	HNRNPA1L2	Q32P51	320 aa	Known RBP	18.99	■□□□□ 0.63
CIRBP-238	ENST00000592412	PMF1	Q6P1K2	205 aa		18.99	■□□□□ 0.63
CIRBP-238	ENST00000592412	NCEH1	Q6PIU2	408 aa		18.99	■□□□□ 0.63
CIRBP-238	ENST00000592412	ADAT2	Q7Z6V5	191 aa	Known RBP	18.99	■□□□□ 0.63
CIRBP-238	ENST00000592412	FIBIN	Q8TAL6	211 aa		18.99	■□□□□ 0.63
CIRBP-238	ENST00000592412	CCDC47	Q96A33	483 aa	Known RBP	18.99	■□□□□ 0.63
CIRBP-238	ENST00000592412	FBXL12	Q9NXK8	326 aa		18.99	■□□□□ 0.63
CIRBP-238	ENST00000592412	ZDHHC9	Q9Y397	364 aa		18.99	■□□□□ 0.63
CIRBP-238	ENST00000592412	FAM47DP	A6NHR8	397 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	MID1	O15344	667 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	EPB41	P11171	864 aa	Known RBP	18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	VDR	P11473	427 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	CSK	P41240	450 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	DNAJC3	Q13217	504 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	CST6	Q15828	149 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	FSCB	Q5H9T9	825 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	C9orf64	Q5T6V5	341 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	MMS22L	Q6ZRQ5	1243 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	MFN1	Q8IWA4	741 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	DHX40	Q8IX18	779 aa	Known RBP	18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	SLC35F5	Q8WV83	523 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	SPATA32	Q96LK8	384 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	ELF4	Q99607	663 aa	Predicted RBP	18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	ACE2	Q9BYF1	805 aa	Predicted RBP	18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	IRX2	Q9BZI1	471 aa	Predicted RBP	18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	NEUROG2	Q9H2A3	272 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	STIM2	Q9P246	746 aa		18.98	■□□□□ 0.63
CIRBP-238	ENST00000592412	NYNRIN	Q9P2P1	1898 aa	Known RBP	18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412		A0A1W2PP55	124 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412		A0A1W2PR77	199 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	CETN3	O15182	167 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	IRAK2	O43187	625 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	DFNA5	O60443	496 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	STX10	O60499	249 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	FYN	P06241	537 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	CTSO	P43234	321 aa	Predicted RBP	18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	RPS24	P62847	133 aa	Known RBP	18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	ARID5B	Q14865	1188 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	DCAF17	Q5H9S7	520 aa	Predicted RBP	18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	LCLAT1	Q6UWP7	414 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	TMPRSS12	Q86WS5	348 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	SAP25	Q8TEE9	199 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	AZIN2	Q96A70	460 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	FCRL2	Q96LA5	508 aa	Predicted RBP	18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	ADAMTS1	Q9UHI8	967 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	SCML1	Q9UN30	329 aa		18.97	■□□□□ 0.63
CIRBP-238	ENST00000592412	PTPRQ	Q9UMZ3	2332 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	TTC34	A8MYJ7	566 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412		E9PAM4	449 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	RNF225	M0QZC1	329 aa	Predicted RBP	18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	ENC1	O14682	589 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	CALCA	P01258	141 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	LTF	P02788	710 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	SLC11A2	P49281	568 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	PMS1	P54277	932 aa	Known RBP	18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	C21orf59	P57076	290 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	TBX4	P57082	545 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	LRMP	Q12912	555 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	TCERG1L	Q5VWI1	586 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	NUGGC	Q68CJ6	796 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	MMAA	Q8IVH4	418 aa	Known RBP	18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	HSCB	Q8IWL3	235 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	UNC45B	Q8IWX7	931 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	AADAT	Q8N5Z0	425 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	HJURP	Q8NCD3	748 aa	Predicted RBP	18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	GANC	Q8TET4	914 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	IRGQ	Q8WZA9	623 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	SLC35C1	Q96A29	364 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	FAM129B	Q96TA1	746 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	NUCKS1	Q9H1E3	243 aa	Known RBP	18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	NCKAP1	Q9Y2A7	1128 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	PCDHGA1	Q9Y5H4	931 aa		18.96	■□□□□ 0.63
CIRBP-238	ENST00000592412	SLC16A3	O15427	465 aa	Known RBP	18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	TLX3	O43711	291 aa	Predicted RBP	18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	RNASEH2A	O75792	299 aa	Known RBP	18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	ASL	P04424	464 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	HSP90AA1	P07900	732 aa	Known RBP	18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	ITPKB	P27987	946 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	PRCP	P42785	496 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	ACADVL	P49748	655 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	INAVA	Q3KP66	663 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	PITRM1	Q5JRX3	1037 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	CARNMT1	Q8N4J0	409 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	KDM1B	Q8NB78	822 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	ENGASE	Q8NFI3	743 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	OR2T34	Q8NGX1	318 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	PIP4K2C	Q8TBX8	421 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	KAT5	Q92993	513 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	SLC39A13	Q96H72	371 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	CNDP2	Q96KP4	475 aa	Known RBP	18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	DCBLD2	Q96PD2	775 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	XPO7	Q9UIA9	1087 aa	Known RBP	18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	SLCO3A1	Q9UIG8	710 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	KIAA1257	Q9ULG3	409 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	FZD4	Q9ULV1	537 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	ERVW-1	Q9UQF0	538 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	ITIH6	Q6UXX5	1313 aa		18.95	■□□□□ 0.62
CIRBP-238	ENST00000592412	ZNF202	O95125	648 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	PRB1	P04280	392 aa		18.94	■□□□□ 0.62
CIRBP-238	ENST00000592412	CD38	P28907	300 aa		18.94	■□□□□ 0.62

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