RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SLC30A5Q8TAD4 765 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 TTC17Q96AE7 1141 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 TBCBQ99426 244 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 MKRN2Q9H000 416 aaKnown RBP28.15■■■□□ 2.1
SMAD4-213ENST00000591914 TMEM51Q9NW97 253 aa28.15■■■□□ 2.1
SMAD4-213ENST00000591914 INTS6Q9UL03 887 aaKnown RBP28.15■■■□□ 2.1
SMAD4-213ENST00000591914 DNAH14Q0VDD8 3507 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 A0A1B0GTH6 734 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 MAP3K13O43283 966 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 F9P00740 461 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 EPHX1P07099 455 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 CENPCQ03188 943 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 CCDC6Q16204 474 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 FNDC3BQ53EP0 1204 aaKnown RBP28.14■■■□□ 2.1
SMAD4-213ENST00000591914 SPDYCQ5MJ68 293 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 RABGAP1LQ5R372 815 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 FBXL22Q6P050 247 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 LPCAT2Q7L5N7 544 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 BNIPLQ7Z465 357 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 CBX8Q9HC52 389 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 ARHGEF38Q9NXL2 777 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 MYO6Q9UM54 1294 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 HS3ST4Q9Y661 456 aa28.14■■■□□ 2.1
SMAD4-213ENST00000591914 IGHV1OR15-9A0A0B4J2B8 117 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 A0A1W2PQC6 194 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 H0Y626 953 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 PAGE1O75459 146 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 CREB5Q02930 508 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 DEUP1Q05D60 604 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 PTP4A2Q12974 167 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 CAMK2GQ13555 558 aaPredicted RBP28.13■■■□□ 2.09
SMAD4-213ENST00000591914 AUHQ13825 339 aaKnown RBP28.13■■■□□ 2.09
SMAD4-213ENST00000591914 CLEC16AQ2KHT3 1053 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 METTL3Q86U44 580 aaKnown RBP28.13■■■□□ 2.09
SMAD4-213ENST00000591914 BAP1Q92560 729 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 NAP1L5Q96NT1 182 aaPredicted RBP28.13■■■□□ 2.09
SMAD4-213ENST00000591914 C11orf70Q9BRQ4 267 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 WDCPQ9H6R7 721 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 PRDM16Q9HAZ2 1276 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 ANLNQ9NQW6 1124 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 VPS45Q9NRW7 570 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 KIAA1522Q9P206 1035 aaPredicted RBP28.13■■■□□ 2.09
SMAD4-213ENST00000591914 PAXBP1Q9Y5B6 917 aa28.13■■■□□ 2.09
SMAD4-213ENST00000591914 A0A1B0GVM2 712 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 TCAF2A6NFQ2 919 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 ADCY5O95622 1261 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 HLA-EP13747 358 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 FERP16591 822 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 CSKP41240 450 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 COPAP53621 1224 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 KIAA1324Q6UXG2 1013 aaKnown RBP28.12■■■□□ 2.09
SMAD4-213ENST00000591914 SLC36A4Q6YBV0 504 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 SND1Q7KZF4 910 aaKnown RBP eCLIP28.12■■■□□ 2.09
SMAD4-213ENST00000591914 CIR1Q86X95 450 aaPredicted RBP28.12■■■□□ 2.09
SMAD4-213ENST00000591914 CCAR2Q8N163 923 aaKnown RBP28.12■■■□□ 2.09
SMAD4-213ENST00000591914 AGPAT1Q99943 283 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 TKTL2Q9H0I9 626 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 METTL5Q9NRN9 209 aaKnown RBP28.12■■■□□ 2.09
SMAD4-213ENST00000591914 DLL3Q9NYJ7 618 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 NUP205Q92621 2012 aa28.12■■■□□ 2.09
SMAD4-213ENST00000591914 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 I6L893 689 aaPredicted RBP28.11■■■□□ 2.09
SMAD4-213ENST00000591914 ASLP04424 464 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 CCDC172P0C7W6 258 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 C7P10643 843 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 NSFP46459 744 aaKnown RBP28.11■■■□□ 2.09
SMAD4-213ENST00000591914 GSCP56915 257 aaPredicted RBP28.11■■■□□ 2.09
SMAD4-213ENST00000591914 SF3A2Q15428 464 aaKnown RBP28.11■■■□□ 2.09
SMAD4-213ENST00000591914 RSPO4Q2I0M5 234 aaPredicted RBP28.11■■■□□ 2.09
SMAD4-213ENST00000591914 PITRM1Q5JRX3 1037 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 IRF2BP2Q7Z5L9 587 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 LUZP1Q86V48 1076 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 PHF13Q86YI8 300 aaPredicted RBP28.11■■■□□ 2.09
SMAD4-213ENST00000591914 TMPRSS6Q8IU80 811 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 TMEFF1Q8IYR6 380 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 IGSF8Q969P0 613 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 MYO19Q96H55 970 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 CFAP57Q96MR6 1250 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 RPRD1AQ96P16 312 aaPredicted RBP28.11■■■□□ 2.09
SMAD4-213ENST00000591914 CD93Q9NPY3 652 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 CYP8B1Q9UNU6 501 aa28.11■■■□□ 2.09
SMAD4-213ENST00000591914 TNRC6BQ9UPQ9 1833 aaKnown RBP28.11■■■□□ 2.09
SMAD4-213ENST00000591914 CAVIN2O95810 425 aa28.1■■■□□ 2.09
SMAD4-213ENST00000591914 DHPSP49366 369 aaPredicted RBP28.1■■■□□ 2.09
SMAD4-213ENST00000591914 SLC12A1Q13621 1099 aa28.1■■■□□ 2.09
SMAD4-213ENST00000591914 C5orf22Q49AR2 442 aa28.1■■■□□ 2.09
SMAD4-213ENST00000591914 CYP2U1Q7Z449 544 aa28.1■■■□□ 2.09
SMAD4-213ENST00000591914 EMC1Q8N766 993 aa28.1■■■□□ 2.09
SMAD4-213ENST00000591914 ZNF366Q8N895 744 aa28.1■■■□□ 2.09
SMAD4-213ENST00000591914 SMOC1Q9H4F8 434 aa28.1■■■□□ 2.09
SMAD4-213ENST00000591914 ADAM22Q9P0K1 906 aa28.1■■■□□ 2.09
SMAD4-213ENST00000591914 USP36Q9P275 1121 aaKnown RBP28.1■■■□□ 2.09
SMAD4-213ENST00000591914 VANGL2Q9ULK5 521 aa28.1■■■□□ 2.09
SMAD4-213ENST00000591914 LAMA1P25391 3075 aa28.1■■■□□ 2.09
SMAD4-213ENST00000591914 AP5Z1O43299 807 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 MOCS3O95396 460 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 SERPINC1P01008 464 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 SDHBP21912 280 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 GGCXP38435 758 aa28.09■■■□□ 2.09
SMAD4-213ENST00000591914 PTGER3P43115 390 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms