RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PTPRNQ16849 979 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 DCAF12L1Q5VU92 463 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 NUGGCQ68CJ6 796 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 TTI2Q6NXR4 508 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 BEND5Q7L4P6 421 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 RAB44Q7Z6P3 723 aaPredicted RBP10.82□□□□□ -0.68
VPS4B-207ENST00000591519 AHI1Q8N157 1196 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 ZNF557Q8N988 423 aaPredicted RBP10.82□□□□□ -0.68
VPS4B-207ENST00000591519 EHBP1Q8NDI1 1231 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 LMLNQ96KR4 655 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 OSGEPQ9NPF4 335 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 CTNND2Q9UQB3 1225 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 PCDHB4Q9Y5E5 795 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 MSI1O43347 362 aaKnown RBP10.81□□□□□ -0.68
VPS4B-207ENST00000591519 ACSL4O60488 711 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 CBFA2T3O75081 653 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 LTFP02788 710 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 CAPNS1P04632 268 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 ATP5BP06576 529 aaKnown RBP10.81□□□□□ -0.68
VPS4B-207ENST00000591519 PABPC1P11940 636 aaKnown RBP10.81□□□□□ -0.68
VPS4B-207ENST00000591519 BMP6P22004 513 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 GPD2P43304 727 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 SLC11A2P49281 568 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 SGSHP51688 502 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 MARSP56192 900 aaKnown RBP10.81□□□□□ -0.68
VPS4B-207ENST00000591519 BNC1Q01954 994 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 MORC3Q14149 939 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 ARID5BQ14865 1188 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 FAM133BQ5BKY9 247 aaKnown RBP10.81□□□□□ -0.68
VPS4B-207ENST00000591519 MBLAC2Q68D91 279 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 IL27RAQ6UWB1 636 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 CLEC17AQ6ZS10 378 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 CHST9Q7L1S5 443 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 PPM1KQ8N3J5 372 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 FIBINQ8TAL6 211 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 GPT2Q8TD30 523 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 STK32AQ8WU08 396 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 NELFBQ8WX92 580 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 ADAMTS14Q8WXS8 1223 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 KAT5Q92993 513 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 TTC17Q96AE7 1141 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 CAMK1GQ96NX5 476 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 NUP62CLQ9H1M0 184 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 CLSTN2Q9H4D0 955 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 PRSS16Q9NQE7 514 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 ABCB8Q9NUT2 735 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 KIAA1522Q9P206 1035 aaPredicted RBP10.81□□□□□ -0.68
VPS4B-207ENST00000591519 SUN2Q9UH99 717 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 GGA2Q9UJY4 613 aa10.81□□□□□ -0.68
VPS4B-207ENST00000591519 KNL1Q8NG31 2342 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 GOLGA6L7A0A1B0GV03 622 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 MEI4A8MW99 385 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 GNA14O95837 355 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 HLA-EP13747 358 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 SLC6A4P31645 630 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 ACSL1P33121 698 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 RGS7P49802 495 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 TBX4P57082 545 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 RPS14P62263 151 aaKnown RBP10.8□□□□□ -0.68
VPS4B-207ENST00000591519 KCNH2Q12809 1159 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 NNTQ13423 1086 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 MEA1Q16626 185 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 CCDC40Q4G0X9 1142 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 FNDC3BQ53EP0 1204 aaKnown RBP10.8□□□□□ -0.68
VPS4B-207ENST00000591519 NADSYN1Q6IA69 706 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 RFWD3Q6PCD5 774 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 TREML4Q6UXN2 200 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 RRAGAQ7L523 313 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 NAXDQ8IW45 347 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 TRIM59Q8IWR1 403 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 CHCHD4Q8N4Q1 142 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 KDM1BQ8NB78 822 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 CYB5D2Q8WUJ1 264 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 GOLGA1Q92805 767 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 MYO19Q96H55 970 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 SLC39A13Q96H72 371 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 FCRL2Q96LA5 508 aaPredicted RBP10.8□□□□□ -0.68
VPS4B-207ENST00000591519 DDX50Q9BQ39 737 aaKnown RBP10.8□□□□□ -0.68
VPS4B-207ENST00000591519 LHX5Q9H2C1 402 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 EIF2B4Q9UI10 523 aaKnown RBP10.8□□□□□ -0.68
VPS4B-207ENST00000591519 KLK13Q9UKR3 277 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 PCOLCE2Q9UKZ9 415 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 SCML1Q9UN30 329 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 TLR6Q9Y2C9 796 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.8□□□□□ -0.68
VPS4B-207ENST00000591519 PCDHB9Q9Y5E1 797 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 PCDHGB2Q9Y5G2 931 aa10.8□□□□□ -0.68
VPS4B-207ENST00000591519 NUMA1Q14980 2115 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 AKAP13Q12802 2813 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 ASPMQ8IZT6 3477 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 CABIN1Q9Y6J0 2220 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 BICDL2A1A5D9 508 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 SRRM3A6NNA2 597 aaPredicted RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 C10orf142B7Z368 130 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 M0QYV0 167 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 SART1O43290 800 aaKnown RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 TBL1XO60907 577 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 CER1O95813 267 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 POLR2EP19388 210 aaKnown RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 BRD2P25440 801 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms