RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 TKTL2Q9H0I9 626 aa23.1■■□□□ 1.29
MBD3-208ENST00000590830 WDCPQ9H6R7 721 aa23.1■■□□□ 1.29
MBD3-208ENST00000590830 ADAM22Q9P0K1 906 aa23.1■■□□□ 1.29
MBD3-208ENST00000590830 ENDOD1O94919 500 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 F9P00740 461 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 HLA-EP13747 358 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 NSFP46459 744 aaKnown RBP23.09■■□□□ 1.29
MBD3-208ENST00000590830 MON1BQ7L1V2 547 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 RXFP2Q8WXD0 754 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 LOXL4Q96JB6 756 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 MRGPRX1Q96LB2 322 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 ARRDC1-AS1Q9H2J1 176 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 TMEM245Q9H330 911 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 SEPT11Q9NVA2 429 aaKnown RBP23.09■■□□□ 1.29
MBD3-208ENST00000590830 TAS2R14Q9NYV8 317 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 AIPL1Q9NZN9 384 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 VANGL2Q9ULK5 521 aa23.09■■□□□ 1.29
MBD3-208ENST00000590830 TCRBV5S1A1TA0A578 114 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 TYW5A2RUC4 315 aaKnown RBP23.08■■□□□ 1.29
MBD3-208ENST00000590830 C2CD4BA6NLJ0 364 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 EPN2O95208 641 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 DLDP09622 509 aaKnown RBP23.08■■□□□ 1.29
MBD3-208ENST00000590830 CSKP41240 450 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 UBASH3AP57075 661 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 CDH18Q13634 790 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 CCDC14Q49A88 953 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 C5orf22Q49AR2 442 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 BRMS1LQ5PSV4 323 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 SH3PXD2AQ5TCZ1 1133 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 ZNF683Q8IZ20 524 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 APCDD1Q8J025 514 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 CCAR2Q8N163 923 aaKnown RBP23.08■■□□□ 1.29
MBD3-208ENST00000590830 ZNF557Q8N988 423 aaPredicted RBP23.08■■□□□ 1.29
MBD3-208ENST00000590830 MKRN2Q9H000 416 aaKnown RBP23.08■■□□□ 1.29
MBD3-208ENST00000590830 SIK2Q9H0K1 926 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 CD93Q9NPY3 652 aa23.08■■□□□ 1.29
MBD3-208ENST00000590830 H0Y626 953 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 GOLGA6L19H0YKK7 550 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 CCDC172P0C7W6 258 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 POLR2EP19388 210 aaKnown RBP23.07■■□□□ 1.28
MBD3-208ENST00000590830 CTSOP43234 321 aaPredicted RBP23.07■■□□□ 1.28
MBD3-208ENST00000590830 COPAP53621 1224 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 GSCP56915 257 aaPredicted RBP23.07■■□□□ 1.28
MBD3-208ENST00000590830 TPM4P67936 248 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 CCDC6Q16204 474 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 C15orf59Q2T9L4 293 aaPredicted RBP23.07■■□□□ 1.28
MBD3-208ENST00000590830 PITRM1Q5JRX3 1037 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 PMS2CLQ68D20 193 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 ACAD10Q6JQN1 1059 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 SERPINA13PQ6UXR4 307 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 ZNF571Q7Z3V5 609 aaPredicted RBP23.07■■□□□ 1.28
MBD3-208ENST00000590830 ZNF366Q8N895 744 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 MYO19Q96H55 970 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 MRGPRX3Q96LB0 322 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 RPRD1AQ96P16 312 aaPredicted RBP23.07■■□□□ 1.28
MBD3-208ENST00000590830 EDEM3Q9BZQ6 932 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 KIAA1522Q9P206 1035 aaPredicted RBP23.07■■□□□ 1.28
MBD3-208ENST00000590830 PLA2G4CQ9UP65 541 aa23.07■■□□□ 1.28
MBD3-208ENST00000590830 ABCA7Q8IZY2 2146 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 RHOBTB1O94844 696 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 ATP5BP06576 529 aaKnown RBP23.06■■□□□ 1.28
MBD3-208ENST00000590830 EPHX1P07099 455 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 PDGFRAP16234 1089 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 TNFAIP3P21580 790 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 RDXP35241 583 aaKnown RBP23.06■■□□□ 1.28
MBD3-208ENST00000590830 RFC1P35251 1148 aaPredicted RBP23.06■■□□□ 1.28
MBD3-208ENST00000590830 ATP11AP98196 1134 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 C1QBPQ07021 282 aaKnown RBP23.06■■□□□ 1.28
MBD3-208ENST00000590830 MTA1Q13330 715 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 STARD3Q14849 445 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 ASIC2Q16515 512 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 FNDC3BQ53EP0 1204 aaKnown RBP23.06■■□□□ 1.28
MBD3-208ENST00000590830 FIGNQ5HY92 759 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 SFMBT2Q5VUG0 894 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 CXorf57Q6NSI4 855 aaKnown RBP23.06■■□□□ 1.28
MBD3-208ENST00000590830 SND1Q7KZF4 910 aaKnown RBP eCLIP23.06■■□□□ 1.28
MBD3-208ENST00000590830 FAM131BQ86XD5 332 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 OR52K2Q8NGK3 314 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 MTG2Q9H4K7 406 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 HAUS4Q9H6D7 363 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 SEMA4GQ9NTN9 838 aa23.06■■□□□ 1.28
MBD3-208ENST00000590830 SYNCRIPO60506 623 aaKnown RBP23.05■■□□□ 1.28
MBD3-208ENST00000590830 LRP3O75074 770 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 CNTN5O94779 1100 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 CALB1P05937 261 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 KRT3P12035 628 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 MZF1P28698 734 aaPredicted RBP23.05■■□□□ 1.28
MBD3-208ENST00000590830 PRKCIP41743 596 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 NUMBP49757 651 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 CAMK2GQ13555 558 aaPredicted RBP23.05■■□□□ 1.28
MBD3-208ENST00000590830 E2F5Q15329 346 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 ELF2Q15723 593 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 RABGAP1LQ5R372 815 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 WDR59Q6PJI9 974 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 C11orf74Q86VG3 221 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 DNAAF5Q86Y56 855 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 TMPRSS6Q8IU80 811 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 MCOLN2Q8IZK6 566 aa23.05■■□□□ 1.28
MBD3-208ENST00000590830 GPR161Q8N6U8 529 aaKnown RBP23.05■■□□□ 1.28
MBD3-208ENST00000590830 C3orf20Q8ND61 904 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms