RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 A0A1W2PNU3 283 aaPredicted RBP13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 LRRC72A6NJI9 287 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 RPN1P04843 607 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 POLR2EP19388 210 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 MAT2AP31153 395 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 SLC8A1P32418 973 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 CSKP41240 450 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 PSMD8P48556 350 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 TKTL1P51854 596 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 PDE4CQ08493 712 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 CUL4BQ13620 913 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 HNRNPA1L2Q32P51 320 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 ADGRF1Q5T601 910 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 CNNM4Q6P4Q7 775 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 GRAMD1CQ8IYS0 662 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 CACTIN-AS1Q8N1I8 211 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 OR14C36Q8NHC7 312 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 TAS1R2Q8TE23 839 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 TAF4BQ92750 862 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 SKA1Q96BD8 255 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 FAM129BQ96TA1 746 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 OMDQ99983 421 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 ASCL3Q9NQ33 180 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 STIM2Q9P246 746 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 ARHGAP20Q9P2F6 1191 aa13.28□□□□□ -0.28
PRKCSH-210ENST00000589990 TDRD6O60522 2096 aaKnown RBP13.27□□□□□ -0.28
PRKCSH-210ENST00000589990 PMS2P1A4D2B8 440 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 YKT6O15498 198 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 USP12O75317 370 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 ATP5BP06576 529 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 TRIM49P0CI25 452 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 TRIM49CP0CI26 452 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 VAV1P15498 845 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 HARS2P49590 506 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 CCR5P51681 352 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 FAM133BQ5BKY9 247 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 FSCBQ5H9T9 825 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 PIK3R6Q5UE93 754 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 CDCP2Q5VXM1 449 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 NADSYN1Q6IA69 706 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 SHC4Q6S5L8 630 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 TMC6Q7Z403 805 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 STK40Q8N2I9 435 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 SLC4A11Q8NBS3 891 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 KCNE4Q8WWG9 221 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 TTC17Q96AE7 1141 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 HEXIM2Q96MH2 286 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 PRICKLE1Q96MT3 831 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 ZNF578Q96N58 590 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 ERVMER34-1Q9H9K5 563 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 SLCO3A1Q9UIG8 710 aa13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 TLN1Q9Y490 2541 aaKnown RBP13.27□□□□□ -0.29
PRKCSH-210ENST00000589990 A0A1B0GVM2 712 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 YJEFN3A6XGL0 299 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 E7ENQ6 273 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 LATO43561 262 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 ZBED1O96006 694 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 GIMD1P0DJR0 217 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 DRD3P35462 400 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 GCLMP48507 274 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 PPP3CAQ08209 521 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 VAC14Q08AM6 782 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 STK4Q13043 487 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 POM121L1PQ3SYA9 428 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 BROXQ5VW32 411 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 PM20D1Q6GTS8 502 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 NAPEPLDQ6IQ20 393 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 PRICKLE2Q7Z3G6 844 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 ARHGAP18Q8N392 663 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 KIAA0895Q8NCT3 520 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 TATDN2Q93075 761 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 MED8Q96G25 268 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 VCPIP1Q96JH7 1222 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 LRRC27Q9C0I9 530 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 NIF3L1Q9GZT8 377 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 OSBPL2Q9H1P3 480 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 MMRN2Q9H8L6 949 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 CYP3A43Q9HB55 503 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 CGNQ9P2M7 1197 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 FZD4Q9ULV1 537 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 SCML1Q9UN30 329 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 DOPEY2Q9Y3R5 2298 aa13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 HBS1LQ9Y450 684 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-210ENST00000589990 TBC1D3DA0A087WVF3 549 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 TBC1D3IA0A087WXS9 549 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 TBC1D3EA0A087X179 549 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 TBC1D3KA0A087X1G2 549 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 LY6G6EA0A0G2JKS1 128 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 TBC1D3FA6NER0 549 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 TBC1D3LB9A6J9 549 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 CASC3O15234 703 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 FFAR2O15552 330 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 OPA1O60313 960 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 RTN2O75298 545 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 CSO75390 466 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 DXOO77932 396 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 TBC1D3HP0C7X1 549 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 GOT1P17174 413 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 SYT1P21579 422 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms