RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 DPH5Q9H2P9 285 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 FAM114A2Q9NRY5 505 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 ASIC3Q9UHC3 531 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 CPQQ9Y646 472 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 BCLAF3A2AJT9 711 aaKnown RBP17.96■□□□□ 0.47
CXXC1-212ENST00000589940 CFAP69A5D8W1 941 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 KRT14P02533 472 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 KLKB1P03952 638 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 IRF1P10914 325 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 DDX6P26196 483 aaKnown RBP eCLIP17.96■□□□□ 0.47
CXXC1-212ENST00000589940 STIP1P31948 543 aaKnown RBP17.96■□□□□ 0.47
CXXC1-212ENST00000589940 CARSP49589 748 aaKnown RBP17.96■□□□□ 0.47
CXXC1-212ENST00000589940 PDK1Q15118 436 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 TRIP13Q15645 432 aaPredicted RBP17.96■□□□□ 0.47
CXXC1-212ENST00000589940 STXBP5Q5T5C0 1151 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 DENND1CQ8IV53 801 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 CCHCR1Q8TD31 782 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 TCEAL4Q96EI5 215 aa17.96■□□□□ 0.47
CXXC1-212ENST00000589940 QKIQ96PU8 341 aaKnown RBP eCLIP17.96■□□□□ 0.47
CXXC1-212ENST00000589940 HACD1B0YJ81 288 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 PAPLNO95428 1278 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 TACR2P21452 398 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 GDF10P55107 478 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 SLC45A4Q5BKX6 768 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 FAM133BQ5BKY9 247 aaKnown RBP17.95■□□□□ 0.46
CXXC1-212ENST00000589940 DDX42Q86XP3 938 aaKnown RBP eCLIP17.95■□□□□ 0.46
CXXC1-212ENST00000589940 RTL3Q8N8U3 475 aaKnown RBP17.95■□□□□ 0.46
CXXC1-212ENST00000589940 EIF1ADQ8N9N8 165 aaKnown RBP17.95■□□□□ 0.46
CXXC1-212ENST00000589940 FAM71DQ8N9W8 422 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 GLIS1Q8NBF1 620 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 VN1R2Q8NFZ6 395 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 SLC46A2Q9BY10 475 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 ZYG11BQ9C0D3 744 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 PCDH9Q9HC56 1237 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 MPP6Q9NZW5 540 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 SNX24Q9Y343 169 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 DENND4CQ5VZ89 1909 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 WASH4PA8MWX3 477 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 NCAM2O15394 837 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 MOSPD3O75425 235 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 ERLIN1O75477 346 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 IFNB1P01574 187 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 MYBL2P10244 700 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 RPL21P46778 160 aaKnown RBP17.95■□□□□ 0.46
CXXC1-212ENST00000589940 SLC5A9Q2M3M2 681 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 ARHGAP15Q53QZ3 475 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 B4GALNT4Q76KP1 1039 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 GRASPQ7Z6J2 395 aaPredicted RBP17.95■□□□□ 0.46
CXXC1-212ENST00000589940 CCDC33Q8N5R6 958 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 LZTR1Q8N653 840 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 ADAMTS19Q8TE59 1207 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 SFXN1Q9H9B4 322 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 USP29Q9HBJ7 922 aa17.95■□□□□ 0.46
CXXC1-212ENST00000589940 AGO1Q9UL18 857 aaKnown RBP17.95■□□□□ 0.46
CXXC1-212ENST00000589940 GOLGA6L7A0A1B0GV03 622 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 DRGXA6NNA5 263 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 SOBPA7XYQ1 873 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 F5H5T6 163 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 PPP1R12AO14974 1030 aaPredicted RBP17.94■□□□□ 0.46
CXXC1-212ENST00000589940 LATS1O95835 1130 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 RHOQP17081 205 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 MX2P20592 715 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 RBL1P28749 1068 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 ZXDBP98169 803 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 PRSS36Q5K4E3 855 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 GPR158Q5T848 1215 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 NLRP14Q86W24 1093 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 TFB1MQ8WVM0 346 aaKnown RBP17.94■□□□□ 0.46
CXXC1-212ENST00000589940 HNRNPLLQ8WVV9 542 aaKnown RBP17.94■□□□□ 0.46
CXXC1-212ENST00000589940 IGSF8Q969P0 613 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 WBP2Q969T9 261 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 RTP4Q96DX8 246 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 RPRD1AQ96P16 312 aaPredicted RBP17.94■□□□□ 0.46
CXXC1-212ENST00000589940 KLC2Q9H0B6 622 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 DZANK1Q9NVP4 752 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 DONSONQ9NYP3 566 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 NFU1Q9UMS0 254 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 SLC6A4P31645 630 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 ADCY8P40145 1251 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 CLCN6P51797 869 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 NTHL1P78549 312 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 TEAD2Q15562 447 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 C5orf22Q49AR2 442 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 ADGRF1Q5T601 910 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 PRUNE1Q86TP1 453 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 TP53INP2Q8IXH6 220 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 GSPT2Q8IYD1 628 aaKnown RBP17.94■□□□□ 0.46
CXXC1-212ENST00000589940 NETO2Q8NC67 525 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 SMG7Q92540 1137 aaKnown RBP17.94■□□□□ 0.46
CXXC1-212ENST00000589940 LGMNQ99538 433 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 PRDM12Q9H4Q4 367 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 NSUN3Q9H649 340 aaKnown RBP17.94■□□□□ 0.46
CXXC1-212ENST00000589940 TASP1Q9H6P5 420 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 PIDD1Q9HB75 910 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 TMEM248Q9NWD8 314 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 STOML2Q9UJZ1 356 aa17.94■□□□□ 0.46
CXXC1-212ENST00000589940 ZNF197O14709 1029 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 KCNN4O15554 427 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 GREM1O60565 184 aa17.93■□□□□ 0.46
CXXC1-212ENST00000589940 ZSCAN5DPP0CG00 497 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms