RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SLC27A5Q9Y2P5 690 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 RAD54BQ9Y620 910 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 CLUHO75153 1309 aa9.03□□□□□ -0.96
SMAD4-206ENST00000588860 A0A0A0MRY4 1105 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 A6NNZ2 444 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 E7ESA3 106 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 E7EVH7 732 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 F5H423 210 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 ZNF189O75820 626 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 LRIG2O94898 1065 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 RTN3O95197 1032 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 VNN2O95498 520 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 METTL18O95568 372 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 HAPLN1P10915 354 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 TSHRP16473 764 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 TPSB2P20231 275 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 YWHAQP27348 245 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 EPHB2P29323 1055 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 MDH1P40925 334 aaKnown RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 ELK3P41970 407 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 MAGEA6P43360 314 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 ALDH7A1P49419 539 aaKnown RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 GPX6P59796 221 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 USP46P62068 366 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 GPR17Q13304 367 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 MTM1Q13496 603 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 TMED2Q15363 201 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 TPSAB1Q15661 275 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 TUBB8Q3ZCM7 444 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 ANKRD20A2Q5SQ80 823 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 ANKRD20A1Q5TYW2 823 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 ANKRD20A3Q5VUR7 823 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 RWDD4Q6NW29 188 aaKnown RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 RSPO2Q6UXX9 243 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 TAOK1Q7L7X3 1001 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 MON1AQ86VX9 555 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 PALM2Q8IXS6 379 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 NPWQ8N729 165 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 FBXO36Q8NEA4 188 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 C2orf15Q8WU43 125 aaKnown RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 CFAP36Q96G28 342 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 P2RY11Q96G91 374 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 SPATA13Q96N96 652 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 GUCD1Q96NT3 240 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 SERPINB11Q96P15 392 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 WDR83Q9BRX9 315 aaKnown RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 OXCT2Q9BYC2 517 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 FRMD8Q9BZ67 464 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 OSBPL2Q9H1P3 480 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 PRDM12Q9H4Q4 367 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 CWH43Q9H720 699 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 OSER1Q9NX31 292 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 OR12D3Q9UGF7 316 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 LGALS13Q9UHV8 139 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 NUDT5Q9UKK9 219 aa9.02□□□□□ -0.97
SMAD4-206ENST00000588860 ZMYND8Q9ULU4 1186 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-206ENST00000588860 CHD5Q8TDI0 1954 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 POC1B-GALNT4F8VUJ3 575 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 TBC1D4O60343 1298 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 OPHN1O60890 802 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 CDH16O75309 829 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 PAGE1O75459 146 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 MOCS2O96007 188 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-206ENST00000588860 APRTP07741 180 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 SRGAP2BP0DMP2 458 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 ATP2A2P16615 1042 aaKnown RBP9.01□□□□□ -0.97
SMAD4-206ENST00000588860 RPL17P18621 184 aaKnown RBP9.01□□□□□ -0.97
SMAD4-206ENST00000588860 MX2P20592 715 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 SSTR1P30872 391 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 CCR1P32246 355 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 LSP1P33241 339 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 SERPINB6P35237 376 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 FDFT1P37268 417 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 GLUD2P49448 558 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 RPL10AP62906 217 aaKnown RBP9.01□□□□□ -0.97
SMAD4-206ENST00000588860 GALNT2Q10471 571 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 SMARCB1Q12824 385 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 SEMA5AQ13591 1074 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 PPP2R5DQ14738 602 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 EFTUD2Q15029 972 aaKnown RBP eCLIP9.01□□□□□ -0.976e-8■■■■□ 24.3
SMAD4-206ENST00000588860 PSMD5Q16401 504 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 LRRC26Q2I0M4 334 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 TNFAIP8L3Q5GJ75 292 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 FAM117BQ6P1L5 589 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 MSANTD2Q6P1R3 559 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 LRRC31Q6UY01 552 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 TP53INP2Q8IXH6 220 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 TDHQ8IZJ6 230 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 RIBC1Q8N443 379 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-206ENST00000588860 MCUQ8NE86 351 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 ARHGEF2Q92974 986 aaKnown RBP9.01□□□□□ -0.97
SMAD4-206ENST00000588860 TBC1D31Q96DN5 1066 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 SPATA17Q96L03 361 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 HAPLN3Q96S86 360 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 ZBED2Q9BTP6 218 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 CEP41Q9BYV8 373 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 SIK2Q9H0K1 926 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 CRISPLD1Q9H336 500 aa9.01□□□□□ -0.97
SMAD4-206ENST00000588860 PRDM5Q9NQX1 630 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms