RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 RFWD3Q6PCD5 774 aa23.33■■□□□ 1.32
ACTN4-210ENST00000588618 BPIFB1Q8TDL5 484 aa23.33■■□□□ 1.32
ACTN4-210ENST00000588618 MAIP1Q8WWC4 291 aa23.33■■□□□ 1.32
ACTN4-210ENST00000588618 RSPRY1Q96DX4 576 aa23.33■■□□□ 1.32
ACTN4-210ENST00000588618 ZYG11BQ9C0D3 744 aa23.33■■□□□ 1.32
ACTN4-210ENST00000588618 ARHGEF4Q9NR80 690 aa23.33■■□□□ 1.32
ACTN4-210ENST00000588618 THG1LQ9NWX6 298 aaKnown RBP23.33■■□□□ 1.32
ACTN4-210ENST00000588618 DONSONQ9NYP3 566 aa23.33■■□□□ 1.32
ACTN4-210ENST00000588618 MYOFQ9NZM1 2061 aa23.33■■□□□ 1.32
ACTN4-210ENST00000588618 GRXCR2A6NFK2 248 aa23.32■■□□□ 1.32
ACTN4-210ENST00000588618 APOL1O14791 398 aa23.32■■□□□ 1.32
ACTN4-210ENST00000588618 CST8O60676 142 aa23.32■■□□□ 1.32
ACTN4-210ENST00000588618 ZFXP17010 805 aaPredicted RBP23.32■■□□□ 1.32
ACTN4-210ENST00000588618 AMPD1P23109 780 aa23.32■■□□□ 1.32
ACTN4-210ENST00000588618 CKAP4Q07065 602 aaKnown RBP23.32■■□□□ 1.32
ACTN4-210ENST00000588618 DPYSQ14117 519 aa23.32■■□□□ 1.32
ACTN4-210ENST00000588618 LRRN4CLQ8ND94 238 aa23.32■■□□□ 1.32
ACTN4-210ENST00000588618 LRRC3BQ96PB8 259 aa23.32■■□□□ 1.32
ACTN4-210ENST00000588618 PRDM16Q9HAZ2 1276 aa23.32■■□□□ 1.32
ACTN4-210ENST00000588618 PPARGC1AQ9UBK2 798 aaKnown RBP23.32■■□□□ 1.32
ACTN4-210ENST00000588618 HEPACAM2A8MVW5 462 aa23.31■■□□□ 1.32
ACTN4-210ENST00000588618 MTSS1LQ765P7 747 aa23.31■■□□□ 1.32
ACTN4-210ENST00000588618 KIAA1958Q8N8K9 716 aa23.31■■□□□ 1.32
ACTN4-210ENST00000588618 OTUB2Q96DC9 234 aa23.31■■□□□ 1.32
ACTN4-210ENST00000588618 AP1M1Q9BXS5 423 aa23.31■■□□□ 1.32
ACTN4-210ENST00000588618 FAM50BQ9Y247 325 aa23.31■■□□□ 1.32
ACTN4-210ENST00000588618 R3HDM2Q9Y2K5 976 aaKnown RBP23.31■■□□□ 1.32
ACTN4-210ENST00000588618 GOLGA6L10A0A0M3HER8 536 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 TRDMT1O14717 391 aaKnown RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 TSPAN3O60637 253 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 CYBBP04839 570 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 HOXC13P31276 330 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 TTC39BQ5VTQ0 682 aaPredicted RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 TMCO3Q6UWJ1 677 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 YAF2Q8IY57 180 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 CPXM2Q8N436 756 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 PLD5Q8N7P1 536 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 TDRD5Q8NAT2 981 aaKnown RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 ST13P5Q8NFI4 369 aaPredicted RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 MAFAQ8NHW3 353 aaPredicted RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 IGSF8Q969P0 613 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 P2RY11Q96G91 374 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 CARD6Q9BX69 1037 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 MPP6Q9NZW5 540 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 ERCC2P18074 760 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 SERPINB6P35237 376 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 IFNAR2P48551 515 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 VCPP55072 806 aaKnown RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 LEXMQ3ZCV2 418 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 SLC9A4Q6AI14 798 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 TANGO2Q6ICL3 276 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 BBS12Q6ZW61 710 aa23.3■■□□□ 1.32
ACTN4-210ENST00000588618 ZNF572Q7Z3I7 529 aaPredicted RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 HJURPQ8NCD3 748 aaPredicted RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 TMA16Q96EY4 203 aaKnown RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 PRICKLE1Q96MT3 831 aaPredicted RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 DUS2Q9NX74 493 aaKnown RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 SAE1Q9UBE0 346 aaPredicted RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 KIF26AQ9ULI4 1882 aaPredicted RBP23.3■■□□□ 1.32
ACTN4-210ENST00000588618 IGLV3-10A0A075B6K4 115 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 DCLK1O15075 740 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 SGSHP51688 502 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 NCBP2-AS2Q69YL0 99 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 TPGS1Q6ZTW0 290 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 FAM217AQ8IXS0 508 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 CFAP52Q8N1V2 620 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 DDI1Q8WTU0 396 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 ELSPBP1Q96BH3 223 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 HAUS1Q96CS2 278 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 FAM118BQ9BPY3 351 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 EPS15L1Q9UBC2 864 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 WNT6Q9Y6F9 365 aa23.29■■□□□ 1.32
ACTN4-210ENST00000588618 GFRA2O00451 464 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 CNTN5O94779 1100 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 PECAM1P16284 738 aaPredicted RBP23.28■■□□□ 1.32
ACTN4-210ENST00000588618 RHOQP17081 205 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 FCARP24071 287 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 PUS10Q3MIT2 529 aaKnown RBP23.28■■□□□ 1.32
ACTN4-210ENST00000588618 MPPE1Q53F39 396 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 NPNTQ6UXI9 565 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 CIR1Q86X95 450 aaPredicted RBP23.28■■□□□ 1.32
ACTN4-210ENST00000588618 CCDC117Q8IWD4 279 aaPredicted RBP23.28■■□□□ 1.32
ACTN4-210ENST00000588618 PRELID2Q8N945 189 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 TTC13Q8NBP0 860 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 NETO2Q8NC67 525 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 OSCP1Q8WVF1 389 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 PHF7Q9BWX1 381 aaPredicted RBP23.28■■□□□ 1.32
ACTN4-210ENST00000588618 DRGXA6NNA5 263 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 KRIT1O00522 736 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 TGM2P21980 687 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 RPS24P62847 133 aaKnown RBP23.28■■□□□ 1.32
ACTN4-210ENST00000588618 ALFQ53S48 1182 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 TFAP2DQ7Z6R9 452 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 RTL3Q8N8U3 475 aaKnown RBP23.28■■□□□ 1.32
ACTN4-210ENST00000588618 MNS1Q8NEH6 495 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 SPATA4Q8NEY3 305 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 ATG4AQ8WYN0 398 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 P3H4Q92791 437 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 KXD1Q9BQD3 176 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 RBM12Q9NTZ6 932 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms